RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SESTD1Q86VW0 696 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 C4orf33Q8N1A6 199 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 DYDC1Q8WWB3 177 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 PPM1EQ8WY54 764 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 CPT1BQ92523 772 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 ROPN1BQ9BZX4 212 aaPredicted RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 ROPN1Q9HAT0 212 aaPredicted RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.36□□□□□ -0.43
RHO-201ENST00000296271 A0A1W2PPM1 405 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 TRUB2O95900 331 aaKnown RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 CETN2P41208 172 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 RABGGTBP53611 331 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 FAXCQ5TGI0 409 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 EXOC8Q8IYI6 725 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 CENPTQ96BT3 561 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 MCRS1Q96EZ8 462 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 PAIP2Q9BPZ3 127 aaKnown RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 EURLQ9NYK6 297 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 CLUHO75153 1309 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 EXOC1LA0A1B0GW35 172 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 MED7O43513 233 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 AVILO75366 819 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 LMO2P25791 158 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 ACVR2BQ13705 512 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 IGDCC3Q8IVU1 814 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 C7orf31Q8N865 590 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 SHCBP1Q8NEM2 672 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 NKD2Q969F2 451 aaPredicted RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 FLRT1Q9NZU1 646 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 CPA4Q9UI42 421 aa12.35□□□□□ -0.43
RHO-201ENST00000296271 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
RHO-201ENST00000296271 RASA4BC9J798 803 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 MAGEB2O15479 319 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 RASA4O43374 803 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 FOXN2P32314 431 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 CDH6P55285 790 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 MAML1Q92585 1016 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.43
RHO-201ENST00000296271 KLF6Q99612 283 aaPredicted RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 ASB7Q9H672 318 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 VTA1Q9NP79 307 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 NGRNQ9NPE2 291 aaKnown RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 DDX56Q9NY93 547 aaKnown RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 GRID1Q9ULK0 1009 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 SPTLC1O15269 473 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 ITGAVP06756 1048 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 CCDC130P13994 396 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 WDR4P57081 412 aaKnown RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 BEX3Q00994 111 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 CAV1Q03135 178 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 ZNF268Q14587 947 aaPredicted RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 CCL14Q16627 93 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 NUGGCQ68CJ6 796 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 CCDC121Q6ZUS5 278 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 BBS12Q6ZW61 710 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 PIGWQ7Z7B1 504 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 DNAJB3Q8WWF6 145 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 TRIM56Q9BRZ2 755 aaKnown RBP12.34□□□□□ -0.43
RHO-201ENST00000296271 ADAMTS10Q9H324 1103 aa12.34□□□□□ -0.43
RHO-201ENST00000296271 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 F5H423 210 aaPredicted RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 RBP3P10745 1247 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 FGFR1P11362 822 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 VDRP11473 427 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 BASP1P80723 227 aaKnown RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 RBP5P82980 135 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 TNFAIP2Q03169 654 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 TAP1Q03518 808 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 ANKRD20A8PQ5CZ79 823 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 CGB2Q6NT52 195 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 FAM47EQ6ZV65 393 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 CATSPER4Q7RTX7 472 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 CCT6BQ92526 530 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 TINF2Q9BSI4 451 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 PNMA3Q9UL41 463 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 DRG1Q9Y295 367 aaKnown RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.43
RHO-201ENST00000296271 HEY1Q9Y5J3 304 aa12.33□□□□□ -0.43
RHO-201ENST00000296271 RBM47A0AV96 593 aaKnown RBP12.33□□□□□ -0.44
RHO-201ENST00000296271 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
RHO-201ENST00000296271 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms