RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 CLCNKBP51801 687 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 SOX4Q06945 474 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 KCNT1Q5JUK3 1230 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 ALKAL1Q6UXT8 129 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 SPOCD1Q6ZMY3 1216 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 SLC24A5Q71RS6 500 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 UROC1Q96N76 676 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 SEZ6LQ9BYH1 1024 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 DPEP3Q9H4B8 488 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 USP18Q9UMW8 372 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 PQBP1O60828 265 aaKnown RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 KRT10P13645 584 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 PAX3P23760 479 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 TNFRSF8P28908 595 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 IFRD2Q12894 506 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 MAPRE1Q15691 268 aaKnown RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 PPP6R3Q5H9R7 873 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 PCDHB7Q9Y5E2 793 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 SQORQ9Y6N5 450 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 ZNF623O75123 536 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 CKBP12277 381 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 WARSP23381 471 aaKnown RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 ZNF143P52747 638 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 HTRA3P83110 453 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 MFSD7Q6UXD7 560 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 POLNQ7Z5Q5 900 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 KRT82Q9NSB4 513 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 TADA2AO75478 443 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 SELPP16109 830 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 LMO2P25791 158 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 ARL4AP40617 200 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 DENND2CQ68D51 928 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 PMF1Q6P1K2 205 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 EIF1ADQ8N9N8 165 aaKnown RBP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 STK32AQ8WU08 396 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 WNT8BQ93098 351 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 TJP2Q9UDY2 1190 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 H7C0C1 242 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 PTGESO14684 152 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 MYBL2P10244 700 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 MIPP30301 263 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 ATP5OP48047 213 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CCNG2Q16589 344 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 ATP13A4Q4VNC1 1196 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 LRRC8DQ7L1W4 858 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 ZNF771Q7L3S4 317 aaPredicted RBP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 FAM172AQ8WUF8 416 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 PPP1R10Q96QC0 940 aaKnown RBP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■■□□ 15
PPP1CB-201ENST00000296122 HPCAL4Q9UM19 191 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CST8O60676 142 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 SASH3O75995 380 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 FAM163BP0C2L3 166 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 NPR3P17342 541 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 BYSLQ13895 437 aaKnown RBP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CEP85LQ5SZL2 805 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 ECHDC2Q86YB7 292 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CAVIN3Q969G5 261 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 FAM118BQ9BPY3 351 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 NR2E1Q9Y466 385 aa13.8□□□□□ -0.2
PPP1CB-201ENST00000296122 CITO14578 2027 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 GOLGA6CA6NDK9 693 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 SPTLC1O15269 473 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 GOLGA6DP0CG33 693 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 MAP3K7CLP57077 242 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 SLMAPQ14BN4 828 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 HOOK3Q86VS8 718 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 GOLGA6AQ9NYA3 693 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 MYZAPP0CAP1 466 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 ADIGQ0VDE8 80 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 TTC30AQ86WT1 665 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 NIPA2Q8N8Q9 360 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 ZNF784Q8NCA9 323 aaPredicted RBP13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 FAM76AQ8TAV0 307 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 P3H4Q92791 437 aa13.79□□□□□ -0.2
PPP1CB-201ENST00000296122 SLITRK1Q96PX8 696 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms