RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TAF11Q15544 211 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 HS6ST3Q8IZP7 471 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 LZICQ8WZA0 190 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 GAD1Q99259 594 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZSWIM1Q9BR11 485 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 CIPCQ9C0C6 399 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAF1Q9UNN5 650 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 CHMP2BQ9UQN3 213 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 ARHGAP10A1A4S6 786 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ARFIP2P53365 341 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 TMEM86AQ8N2M4 240 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 SLC26A7Q8TE54 656 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 THOC1Q96FV9 657 aaKnown RBP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 C9orf72Q96LT7 481 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 COG4Q9H9E3 785 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 F8VZ95 297 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 PSMD10O75832 226 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 EFTUD2Q15029 972 aaKnown RBP eCLIP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 PPM1LQ5SGD2 360 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAM131BQ86XD5 332 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 SLC13A5Q86YT5 568 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 PPIL6Q8IXY8 311 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 SPATA16Q9BXB7 569 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 TRABDQ9H4I3 376 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 MEIS2O14770 477 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 RECQL4O94761 1208 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 CCR1P32246 355 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 GEMIN4P57678 1058 aaKnown RBP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 TTLL9Q3SXZ7 439 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 MLXIPLQ9NP71 852 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 TMEM51Q9NW97 253 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 TRIM10Q9UDY6 481 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 SMG5Q9UPR3 1016 aaKnown RBP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 PRR23AA6NEV1 266 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 YWHAQP27348 245 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 PDCLQ13371 301 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZDHHC17Q8IUH5 632 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ABRAQ8N0Z2 381 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZNF669Q96BR6 464 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ACTR5Q9H9F9 607 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 AP4E1Q9UPM8 1137 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 COBLL1Q53SF7 1204 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 LRRC43Q8N309 656 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZNF558Q96NG5 402 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 DNAJC7Q99615 494 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 TSPAN16Q9UKR8 245 aa18.4■□□□□ 0.54
CDC42EP3-201ENST00000295324 CHRM3P20309 590 aa18.39■□□□□ 0.54
CDC42EP3-201ENST00000295324 GCNT1Q02742 428 aa18.39■□□□□ 0.54
CDC42EP3-201ENST00000295324 SNCBQ16143 134 aa18.39■□□□□ 0.54
CDC42EP3-201ENST00000295324 RXFP2Q8WXD0 754 aa18.39■□□□□ 0.54
CDC42EP3-201ENST00000295324 ATP6V1G3Q96LB4 118 aa18.39■□□□□ 0.54
CDC42EP3-201ENST00000295324 MAPRE2Q15555 327 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 AP1ARQ63HQ0 302 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 MTMR9Q96QG7 549 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 FAM118BQ9BPY3 351 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 CELF4Q9BZC1 486 aaKnown RBP18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 KCNMB3Q9NPA1 279 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLIT3O75094 1523 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 ACAT1P24752 427 aaKnown RBP18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 RETSATQ6NUM9 610 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 PSMC3IPQ9P2W1 217 aaPredicted RBP18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 HMGCRP04035 888 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 IGFBP4P22692 258 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 RRM1P23921 792 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 AARS2Q5JTZ9 985 aaKnown RBP18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 OOSP2Q86WS3 158 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 COG1Q8WTW3 980 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 YIPF2Q9BWQ6 316 aa18.39■□□□□ 0.53
CDC42EP3-201ENST00000295324 RHOAP61586 193 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 STARD3Q14849 445 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 STN1Q9H668 368 aaKnown RBP18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 SPATA31C2B4DYI2 1134 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 SPAG7O75391 227 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 ATP5HO75947 161 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 CYP3A7P24462 503 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 FNTAP49354 379 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 C1QBPQ07021 282 aaKnown RBP18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 FOXD4Q12950 439 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 PREPLQ4J6C6 727 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 TRIM48Q8IWZ4 208 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 KIAA0895Q8NCT3 520 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 PEX19P40855 299 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 MRNIPQ6NTE8 343 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 USP38Q8NB14 1042 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 ACSF2Q96CM8 615 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 STAMBPL1Q96FJ0 436 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 UROC1Q96N76 676 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 ASPSCR1Q9BZE9 553 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 DCTN4Q9UJW0 460 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 HEATR9A2RTY3 570 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 HAUS5O94927 633 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 PAEPP09466 180 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 MCL1Q07820 350 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 TFDP3Q5H9I0 405 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms