RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 ODC1P11926 461 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 CPB1P15086 417 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 NNMTP40261 264 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 HSPA13P48723 471 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 TPI1P60174 286 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 ERMARDQ5T6L9 678 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 ART4Q93070 314 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 PLEKHA5Q9HAU0 1116 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 PLIN4Q96Q06 1357 aa10.34□□□□□ -0.75
PCYT1A-201ENST00000292823 MAGEA13PA6NCF6 341 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 TGM2P21980 687 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 KDSRQ06136 332 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 EPC2Q52LR7 807 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 DUPD1Q68J44 220 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 TMEM154Q6P9G4 183 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 MPZL3Q6UWV2 235 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 SV2AQ7L0J3 742 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 IRF2BP2Q7Z5L9 587 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 SCN4BQ8IWT1 228 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 STKLD1Q8NE28 680 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 ATP6V1E2Q96A05 226 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 PAFAH2Q99487 392 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 TARS2Q9BW92 718 aaKnown RBP10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 L3MBTL1Q9Y468 752 aa10.33□□□□□ -0.75
PCYT1A-201ENST00000292823 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 WNT7AO00755 349 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 GNGT2O14610 69 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 ANP32DO95626 131 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 ALADP13716 330 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 TARSP26639 723 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 RECQLP46063 649 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 GOLGA7BQ2TAP0 167 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 PBXIP1Q96AQ6 731 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 LRRC19Q9H756 370 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 DDX4Q9NQI0 724 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 MAGED2Q9UNF1 606 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 FARP1Q9Y4F1 1045 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 LCP1P13796 627 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 KCNA3P22001 575 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 PCBP1Q15365 356 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 CHI3L2Q15782 390 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 PRPF39Q86UA1 669 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 C12orf56Q8IXR9 622 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 HIPK4Q8NE63 616 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 SHCBP1Q8NEM2 672 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 ETNPPLQ8TBG4 499 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 SH2D3AQ9BRG2 576 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 SAR1AQ9NR31 198 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 LSM7Q9UK45 103 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 LAMB4A4D0S4 1761 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 DCDC2CA8MYV0 355 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 TRIM49D1C9J1S8 452 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 WBP4O75554 376 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 MYL2P10916 166 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 ACAP1Q15027 740 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 CBWD6Q4V339 395 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 CBWD3Q5JTY5 395 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 CBWD5Q5RIA9 395 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 CATSPERGQ6ZRH7 1159 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 FAM118BQ9BPY3 351 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 NAT9Q9BTE0 207 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 CHORDC1Q9UHD1 332 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 RNF225M0QZC1 329 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 TULP2O00295 520 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 DDNO94850 711 aaPredicted RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 PAX3P23760 479 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 PRAMEF18Q5VWM3 479 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 IQSEC1Q6DN90 963 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 NOP9Q86U38 636 aaKnown RBP10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 ZNF410Q86VK4 478 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 SLC26A11Q86WA9 606 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 INPP5DQ92835 1189 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 LRRC4BQ9NT99 713 aa10.33□□□□□ -0.76
PCYT1A-201ENST00000292823 EEF2KO00418 725 aaKnown RBP10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 EGFRP00533 1210 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 ALDH5A1P51649 535 aaPredicted RBP10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 GTF2BQ00403 316 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 OTUD4Q01804 1114 aaKnown RBP10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 CYP4A22Q5TCH4 519 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 LRRC6Q86X45 466 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 NT5DC4Q86YG4 428 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 NFASCO94856 1347 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 C3orf70A6NLC5 250 aaPredicted RBP10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 EML1O00423 815 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 MEIS2O14770 477 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 CYBBP04839 570 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 TAF6P49848 677 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 HSD17B4P51659 736 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 LRRC38Q5VT99 294 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 RNF43Q68DV7 783 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 CRELD2Q6UXH1 353 aaPredicted RBP10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 PRUNE1Q86TP1 453 aa10.32□□□□□ -0.76
PCYT1A-201ENST00000292823 FAM71AQ8IYT1 594 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms