RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ALDH1A3P47895 512 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 SERPINB10P48595 397 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 SLC11A2P49281 568 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 SEC24CP53992 1094 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 AARS2Q5JTZ9 985 aaKnown RBP13.27□□□□□ -0.28
PTCD1-201ENST00000292478 FKBP1CQ5VVH2 108 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 ZDHHC17Q8IUH5 632 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 SLC25A41Q8N5S1 370 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 FBXO36Q8NEA4 188 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 SLC39A10Q9ULF5 831 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 HOXA2O43364 376 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 AKT1P31749 480 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 HSPA13P48723 471 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.28
PTCD1-201ENST00000292478 MROH9Q5TGP6 573 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 MRNIPQ6NTE8 343 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 LRRC8BQ6P9F7 803 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 RRM1P23921 792 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 KCNK10P57789 538 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 MTA1Q13330 715 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 C10orf120Q5SQS8 335 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 NT5DC4Q86YG4 428 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 LATS2Q9NRM7 1088 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 PHTF1Q9UMS5 762 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 RFX8Q6ZV50 586 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 UNC45BQ8IWX7 931 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 TBCBQ99426 244 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 CINPQ9BW66 212 aaPredicted RBP13.27□□□□□ -0.29
PTCD1-201ENST00000292478 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
PTCD1-201ENST00000292478 COL5A2P05997 1499 aaPredicted RBP13.27□□□□□ -0.29
PTCD1-201ENST00000292478 PTPN11Q06124 597 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 R3HDM1Q15032 1099 aaKnown RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SPDYCQ5MJ68 293 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SPDYAQ5MJ70 313 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 OTOP1Q7RTM1 612 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 NLRP9Q7RTR0 991 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 TM9SF1O15321 606 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 RHOBTB1O94844 696 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 COPAP53621 1224 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 MYCBPAPQ8TBZ2 947 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 FAM172AQ8WUF8 416 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 DNAJC9Q8WXX5 260 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 KLF6Q99612 283 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 GPR63Q9BZJ6 419 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 PCDH9Q9HC56 1237 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 BST2Q10589 180 aaKnown RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 FLOT2Q14254 428 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 TTLL9Q3SXZ7 439 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 COBLL1Q53SF7 1204 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 ZPBP2Q6X784 338 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 EME1Q96AY2 570 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 RBBP8Q99708 897 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 RPS6KL1Q9Y6S9 549 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 NFIBO00712 420 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 AKAP10O43572 662 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SYF2O95926 243 aaKnown RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 RARRES1P49788 294 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 ZNF268Q14587 947 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 ACOT1Q86TX2 421 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 APLFQ8IW19 511 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 TEKT4Q8WW24 435 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 CDC42EP4Q9H3Q1 356 aaKnown RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SLC40A1Q9NP59 571 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 AVENQ9NQS1 362 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 CHORDC1Q9UHD1 332 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 C2orf81A6NN90 581 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 C5orf58C9J3I9 102 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 CYB561D2O14569 222 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 AIM2O14862 343 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SLITRK3O94933 977 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 CLCN3P51790 818 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SLC47A2Q86VL8 602 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SLC26A11Q86WA9 606 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SUGP1Q8IWZ8 645 aaKnown RBP13.26□□□□□ -0.29
PTCD1-201ENST00000292478 RMDN2Q96LZ7 410 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 SHOC2Q9UQ13 582 aa13.26□□□□□ -0.29
PTCD1-201ENST00000292478 LRRC10BA6NIK2 292 aa13.25□□□□□ -0.29
PTCD1-201ENST00000292478 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTCD1-201ENST00000292478 TBC1D4O60343 1298 aa13.25□□□□□ -0.29
PTCD1-201ENST00000292478 PMS1P54277 932 aaKnown RBP13.25□□□□□ -0.29
PTCD1-201ENST00000292478 HUNKP57058 714 aa13.25□□□□□ -0.29
PTCD1-201ENST00000292478 LAMTOR4Q0VGL1 99 aa13.25□□□□□ -0.29
PTCD1-201ENST00000292478 MEA1Q16626 185 aa13.25□□□□□ -0.29
PTCD1-201ENST00000292478 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms