RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 BADQ92934 168 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 DDX27Q96GQ7 796 aaKnown RBP17.69■□□□□ 0.42
CPSF4-201ENST00000292476 GDF15Q99988 308 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 RGS18Q9NS28 235 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 ADAM22Q9P0K1 906 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 TBX21Q9UL17 535 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 STRIP2Q9ULQ0 834 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 ATP8A1Q9Y2Q0 1164 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
CPSF4-201ENST00000292476 ARL5CA6NH57 179 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 TMEM110-MUSTN1A8MSY1 372 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 PTGESO14684 152 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 FSCN2O14926 492 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 HUS1O60921 280 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 PYGMP11217 842 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 MLH1P40692 756 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 RAP1GAPP47736 663 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 MARCKSL1P49006 195 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 PTP4A2Q12974 167 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 SIX1Q15475 284 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-201ENST00000292476 CNGA2Q16280 664 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 SGO2Q562F6 1265 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-201ENST00000292476 SLC24A5Q71RS6 500 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 SLC4A11Q8NBS3 891 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 APPL2Q8NEU8 664 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 CPA5Q8WXQ8 436 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 C18orf8Q96DM3 657 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 HEXIM2Q96MH2 286 aaKnown RBP17.68■□□□□ 0.42
CPSF4-201ENST00000292476 MIS12Q9H081 205 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 SDCBP2Q9H190 292 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 EPB41L4BQ9H329 900 aa17.68■□□□□ 0.42
CPSF4-201ENST00000292476 TRAPPC3O43617 180 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 BRD2P25440 801 aaKnown RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 HPDP32754 393 aaPredicted RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 NDST1P52848 882 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 MON1BQ7L1V2 547 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 TOP6BLQ8N6T0 577 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 UROC1Q96N76 676 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 CCT8L2Q96SF2 557 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 GAD1Q99259 594 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 TRIM31Q9BZY9 425 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 STMN4Q9H169 189 aaPredicted RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 TSPYL2Q9H2G4 693 aaPredicted RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 PDCD11Q14690 1871 aaKnown RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 KIAA0754O94854 1291 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 MMP8P22894 467 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 RPL21P46778 160 aaKnown RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 SNX16P57768 344 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 TAP1Q03518 808 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ADCY2Q08462 1091 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 GRIK3Q13003 919 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ODF2Q5BJF6 829 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 TTC27Q6P3X3 843 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 TRAF7Q6Q0C0 670 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 AGMOQ6ZNB7 445 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ADAT2Q7Z6V5 191 aaKnown RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ECHDC2Q86YB7 292 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 FBXO25Q8TCJ0 367 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 APBB2Q92870 758 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ART4Q93070 314 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ELOVL4Q9GZR5 314 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 CXCL16Q9H2A7 254 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 PRO3102Q9H379 93 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 SNX25Q9H3E2 840 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 PARVAQ9NVD7 372 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 WHRNQ9P202 907 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 NOVA2Q9UNW9 492 aaKnown RBP17.67■□□□□ 0.42
CPSF4-201ENST00000292476 SNX24Q9Y343 169 aa17.67■□□□□ 0.42
CPSF4-201ENST00000292476 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 GMNCA6NCL1 334 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 INPPL1O15357 1258 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 ATMINO43313 823 aaPredicted RBP17.66■□□□□ 0.42
CPSF4-201ENST00000292476 MGEA5O60502 916 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 RARGP13631 454 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 PLTPP55058 493 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 LILRA4P59901 499 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 ERICH1Q86X53 443 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 PASD1Q8IV76 773 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 RSPH1Q8WYR4 309 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 TNIP3Q96KP6 325 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 HIPK3Q9H422 1215 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 WDR35Q9P2L0 1181 aa17.66■□□□□ 0.42
CPSF4-201ENST00000292476 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
CPSF4-201ENST00000292476 C5orf60A6NFR6 353 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 ECEL1O95672 775 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 TIMP1P01033 207 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 CALCAP01258 141 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 RARAP10276 462 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 CYP2C18P33260 490 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 MAGOHP61326 146 aaKnown RBP17.65■□□□□ 0.42
CPSF4-201ENST00000292476 SOX4Q06945 474 aaPredicted RBP17.65■□□□□ 0.42
CPSF4-201ENST00000292476 SOWAHAQ2M3V2 549 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 C6orf118Q5T5N4 469 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 LIMS2Q7Z4I7 341 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 CCDC105Q8IYK2 499 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms