RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 RARAP10276 462 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 EFHC1Q5JVL4 640 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 TTC30AQ86WT1 665 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 LRRC6Q86X45 466 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 POU5F2Q8N7G0 328 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 RNPEPQ9H4A4 650 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ELP3Q9H9T3 547 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF70Q9UC06 446 aaPredicted RBP15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 DIP2AQ14689 1571 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 TBL3Q12788 808 aaKnown RBP15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 SEMA4DQ92854 862 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 DCDC2Q9UHG0 476 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 MT-CO1P00395 513 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF23P17027 643 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PPATQ06203 517 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 UGP2Q16851 508 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 URGCPQ8TCY9 931 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 GDPD5Q8WTR4 605 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 SH3KBP1Q96B97 665 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 KLK14Q9P0G3 267 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PIM2Q9P1W9 311 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 SEPT3Q9UH03 358 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 SALL1Q9NSC2 1324 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PARNO95453 639 aaKnown RBP15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 IFNA8P32881 189 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PPP3CCP48454 512 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 CLK1P49759 484 aaKnown RBP15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ARHGAP22Q7Z5H3 698 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PNMA5Q96PV4 448 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 USP20Q9Y2K6 914 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ZCCHC23Q6ZST2 131 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 RIT2Q99578 217 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 BTBD10Q9BSF8 475 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 AGXT2Q9BYV1 514 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 PSMD3O43242 534 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 CLPTM1O96005 669 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 SSTR1P30872 391 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 PSMD7P51665 324 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 TRPC7Q9HCX4 862 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 NFIBO00712 420 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 SERPIND1P05546 499 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 BLVRAP53004 296 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 MAPK10P53779 464 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 ATP1A4Q13733 1029 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 COL9A3Q14050 684 aaPredicted RBP15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 PRUNE1Q86TP1 453 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 NT5DC3Q86UY8 548 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 FUKQ8N0W3 1084 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 GPR75-ASB3A0A0A6YYF3 556 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 SAC3D1A6NKF1 404 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 NR5A2O00482 541 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 TKFCQ3LXA3 575 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 SNX30Q5VWJ9 437 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 APLFQ8IW19 511 aaPredicted RBP15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 CHST12Q9NRB3 414 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 PCDHGB4Q9UN71 923 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 FRMPD1Q5SYB0 1578 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 SUPT7LO94864 414 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 BMP6P22004 513 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 PSMA4P25789 261 aaKnown RBP15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 NPTX2P47972 431 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 CPB2Q96IY4 423 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 TEX12Q9BXU0 123 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 TRIM54Q9BYV2 358 aa15.88■□□□□ 0.13
SHROOM4-201ENST00000289292 SPDYE5A6NIY4 337 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 M0QYT0 321 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 RHOBTB1O94844 696 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 IL18RAPO95256 599 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 SPDYE7PQ495Y7 208 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 LRRC74BQ6ZQY2 392 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 MFN1Q8IWA4 741 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 RNF148Q8N7C7 305 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 PTPRHQ9HD43 1115 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 MRPL42Q9Y6G3 142 aaKnown RBP15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 COL3A1P02461 1466 aaPredicted RBP15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 TRPC5OSA6NMA1 111 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 THRAP10827 490 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 RPA3P35244 121 aaPredicted RBP15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 ZNF720Q7Z2F6 126 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 STRA8Q7Z7C7 330 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 SERPINI2O75830 405 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 FSBPO95073 299 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 SERPINB8P50452 374 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 NEUROG2Q9H2A3 272 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 IL17RBQ9NRM6 502 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 USP18Q9UMW8 372 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 KDM6AO15550 1401 aaPredicted RBP15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 ETS1P14921 441 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 ITGB3BPQ13352 177 aaPredicted RBP15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 KYAT1Q16773 422 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 ZRANB3Q5FWF4 1079 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 PLEKHA7Q6IQ23 1121 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 ACOT1Q86TX2 421 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 AGAP11Q8TF27 550 aa15.87■□□□□ 0.13
SHROOM4-201ENST00000289292 FAM172AQ8WUF8 416 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms