RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RNF103O00237 685 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 SASH1O94885 1247 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 FTCDO95954 541 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 QDPRP09417 244 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 EN2P19622 333 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 RGS2P41220 211 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 AGFG1P52594 562 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 NLRP5P59047 1200 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 IFI35P80217 286 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 PTK6Q13882 451 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TRIM25Q14258 630 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 NOLC1Q14978 699 aaKnown RBP eCLIP2.95□□□□□ -1.94
CHD1-201ENST00000284049 VASNQ6EMK4 673 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 KRT28Q7Z3Y7 464 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 CARNMT1Q8N4J0 409 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 SMARCC2Q8TAQ2 1214 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PHACTR3Q96KR7 559 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PIGSQ96S52 555 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 RTKNQ9BST9 563 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 HTATIP2Q9BUP3 242 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 INTS2Q9H0H0 1204 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 FAM105AQ9NUU6 356 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 DDX43Q9NXZ2 648 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 POGKQ9P215 609 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 ASB1Q9Y576 335 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 CYP46A1Q9Y6A2 500 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 A0A088AWK7 358 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 ZNF263O14978 683 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 GRPP07492 148 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 POU1F1P28069 291 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 LIG4P49917 911 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 GPS1Q13098 491 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TAZQ16635 292 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 DGKDQ16760 1214 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 ANKRD40Q6AI12 368 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 ESRP1Q6NXG1 681 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 SPOCD1Q6ZMY3 1216 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 KCTD1Q719H9 257 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 CILP2Q8IUL8 1156 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TMEFF1Q8IYR6 380 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 DNAJC5GQ8N7S2 189 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 POGLUT1Q8NBL1 392 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 RSRC1Q96IZ7 334 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D32Q96NH3 1257 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 IFIH1Q9BYX4 1025 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 SLC25A13Q9UJS0 675 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 HSF4Q9ULV5 492 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PA2G4Q9UQ80 394 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 H0Y3Z8 333 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PGM3O95394 542 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 FAM87AP0C7U9 286 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 GPR15P49685 360 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 NR1H2P55055 460 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 HSP90AB3PQ58FF7 597 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 DNTTIP2Q5QJE6 756 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 CYP4F22Q6NT55 531 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 FAM71DQ8N9W8 422 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 ADAMTS18Q8TE60 1221 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 GRK7Q8WTQ7 553 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 STON2Q8WXE9 905 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 C16orf45Q96MC5 204 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 SERINC2Q96SA4 455 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 OR10A4Q9H209 315 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 CRYBG1Q9Y4K1 1723 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PTPRMP28827 1452 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 NCAPD2Q15021 1401 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TISP43B9A030 160 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 B9A039 149 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 FZD9O00144 591 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MCF2LO15068 1137 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 WFS1O76024 890 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MCM3P25205 808 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SNAPC2Q13487 334 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 RAB30Q15771 203 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 LETM2Q2VYF4 491 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 TOR1AIP1Q5JTV8 583 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SLFN11Q7Z7L1 901 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 SLC9B2Q86UD5 537 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CELF5Q8N6W0 485 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 ZBTB8BQ8NAP8 495 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 OR8H1Q8NGG4 311 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 DNAJB8Q8NHS0 232 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 BICD1Q96G01 975 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 APOPT1Q96IL0 206 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 DYDC2Q96IM9 177 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 VPS50Q96JG6 964 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MCMBPQ9BTE3 642 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MRPL18Q9H0U6 180 aaKnown RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 C17orf75Q9HAS0 396 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PKD2L1Q9P0L9 805 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CAMTA1Q9Y6Y1 1673 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 NPC1L1Q9UHC9 1359 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ERICH4A6NGS2 130 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 MUSKO15146 869 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 VILLO15195 856 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ITGBL1O95965 494 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 ZBTB48P10074 688 aaPredicted RBP2.94□□□□□ -1.94
CHD1-201ENST00000284049 MYBL1P10243 752 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 UBL4AP11441 157 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms