RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 BRAFP15056 766 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 IVDP26440 423 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 SSTR1P30872 391 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 GPD2P43304 727 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 CTCFP49711 727 aaPredicted RBP6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 DRG2P55039 364 aaKnown RBP6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 PTK6Q13882 451 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 GRB14Q14449 540 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 ANKRD22Q5VYY1 191 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC27A1Q6PCB7 646 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 TTC30AQ86WT1 665 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 FAM131BQ86XD5 332 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 UNC45BQ8IWX7 931 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 UBR7Q8N806 425 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 BEST2Q8NFU1 509 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 ADAM32Q8TC27 787 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC2A14Q8TDB8 520 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 FAM172AQ8WUF8 416 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 RUNDC3BQ96NL0 473 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 ELAC2Q9BQ52 826 aaKnown RBP6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 MED10Q9BTT4 135 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 SNX25Q9H3E2 840 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 DHX35Q9H5Z1 703 aaKnown RBP6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC5A4Q9NY91 659 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC12A6Q9UHW9 1150 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 ABT1Q9ULW3 272 aaKnown RBP6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 CNTN6Q9UQ52 1028 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 PTPRFP10586 1907 aa6.34□□□□□ -1.39
TNFSF4-201ENST00000281834 TCRBV7S3A2A0A539 114 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 WDR91A4D1P6 747 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 MYADML2A6NDP7 307 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 RASA4BC9J798 803 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 MCF2LO15068 1137 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 RASA4O43374 803 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 AVILO75366 819 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 KRT7P08729 469 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 VDRP11473 427 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 KDELR1P24390 212 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 SDC4P31431 198 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 MAN1A1P33908 653 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 TCEAL1Q15170 157 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 CST9Q5W186 159 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 XPO6Q96QU8 1125 aaKnown RBP6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 PEBP4Q96S96 227 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 ZIC5Q96T25 663 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 KATNBL1Q9H079 304 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 TMPRSS4Q9NRS4 437 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 WHRNQ9P202 907 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 GJD2Q9UKL4 321 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 CHMP2BQ9UQN3 213 aa6.34□□□□□ -1.4
TNFSF4-201ENST00000281834 CASTOR2A6NHX0 329 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SPTLC1O15269 473 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 GPD1P21695 349 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 VCPP55072 806 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SOX4Q06945 474 aaPredicted RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 NME3Q13232 169 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 EFTUD2Q15029 972 aaKnown RBP eCLIP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SNX17Q15036 470 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CNGA2Q16280 664 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CA9Q16790 459 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 AGBL2Q5U5Z8 902 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 TRNP1Q6NT89 227 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 EXOC3L1Q86VI1 746 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 EIF1ADQ8N9N8 165 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 P3H4Q92791 437 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 KAT2BQ92831 832 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 BCO2Q9BYV7 579 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 TXLNGYQ9BZA5 131 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ARHGAP39Q9C0H5 1083 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 C12orf65Q9H3J6 166 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ALG13Q9NP73 1137 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 HOMER3Q9NSC5 361 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ASNSD1Q9NWL6 643 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SEPT10Q9P0V9 454 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ITGA11Q9UKX5 1188 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 PCDHGC3Q9UN70 934 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ARID2Q68CP9 1835 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SMIM28A0A1B0GU29 152 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 KCNN4O15554 427 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 NUDT17P0C025 328 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 FGFR1P11362 822 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 DARSP14868 501 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 GBP1P32455 592 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 GNL1P36915 607 aaPredicted RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 PSEN2P49810 448 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 YWHAGP61981 247 aaKnown RBP eCLIP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SLC25A11Q02978 314 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 MAP2K5Q13163 448 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SOWAHAQ2M3V2 549 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 FBXO47Q5MNV8 452 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 NUGGCQ68CJ6 796 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 IQSEC1Q6DN90 963 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ANKRD23Q86SG2 305 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CTAGE3PQ8IX95 158 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 LRRC34Q8IZ02 419 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 C12orf50Q8NA57 414 aaPredicted RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 GAD1Q99259 594 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CCDC77Q9BR77 488 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms