RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 LINC00523Q86TU6 105 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 EXD1Q8NHP7 514 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 HNRNPLLQ8WVV9 542 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 EPN3Q9H201 632 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 GGT7Q9UJ14 662 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PIK3CDO00329 1044 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ALDH2P05091 517 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 MAP4P27816 1152 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 FDFT1P37268 417 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ARHGDIAP52565 204 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 BST2Q10589 180 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 MAPRE2Q15555 327 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 TRADDQ15628 312 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 MDH1BQ5I0G3 518 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF280DQ6N043 979 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 RIBC1Q8N443 379 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 SYT15Q9BQS2 421 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 CENPKQ9BS16 269 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 DDX43Q9NXZ2 648 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 GRID1Q9ULK0 1009 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 AP4E1Q9UPM8 1137 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 H0Y626 953 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 STX7O15400 261 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 SYF2O95926 243 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PYGBP11216 843 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 HSD17B3P37058 310 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ELAVL2Q12926 359 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 OVOS1Q6IE37 1185 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 FBXO25Q8TCJ0 367 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ANKRD7Q92527 254 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PPP1R36Q96LQ0 422 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 FRMD8P1Q9BZ68 369 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 TSPAN16Q9UKR8 245 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 TRIM49D1C9J1S8 452 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 LGALS2P05162 132 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 URODP06132 367 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 RGS4P49798 205 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PSEN2P49810 448 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 TKTL1P51854 596 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 KDSRQ06136 332 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PTK6Q13882 451 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 GTF2H3Q13889 308 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 TMEM132BQ14DG7 1078 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 MCOLN2Q8IZK6 566 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ACTL9Q8TC94 416 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ACTRT1Q8TDG2 376 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PNKPQ96T60 521 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 MRPL46Q9H2W6 279 aaKnown RBP11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ECT2Q9H8V3 914 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 NPHS2Q9NP85 383 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 NDE1Q9NXR1 346 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 TRPM5Q9NZQ8 1165 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 SLC39A10Q9ULF5 831 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 F5H5T6 163 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 PEX19P40855 299 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 CDH8P55286 799 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 EFEMP1Q12805 493 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 ARHGAP15Q53QZ3 475 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 KIRREL3Q8IZU9 778 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 FOPNLQ96NB1 174 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 YME1L1Q96TA2 773 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 USP15Q9Y4E8 981 aaPredicted RBP11.71□□□□□ -0.53
USP6NL-201ENST00000277575 LRRC10BA6NIK2 292 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 TISP43B9A030 160 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 EIF3HO15372 352 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP6NL-201ENST00000277575 TGM2P21980 687 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 ACAT1P24752 427 aaKnown RBP11.71□□□□□ -0.53
USP6NL-201ENST00000277575 AARSP49588 968 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP6NL-201ENST00000277575 SYTL3Q4VX76 610 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 SPOCD1Q6ZMY3 1216 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF410Q86VK4 478 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 TINF2Q9BSI4 451 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 CINPQ9BW66 212 aaPredicted RBP11.71□□□□□ -0.53
USP6NL-201ENST00000277575 PORCNQ9H237 461 aa11.71□□□□□ -0.53
USP6NL-201ENST00000277575 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 ANKRD63C9JTQ0 380 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 LSP1P33241 339 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 RAB27AP51159 221 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 ALDH18A1P54886 795 aaKnown RBP11.71□□□□□ -0.54
USP6NL-201ENST00000277575 CUL3Q13618 768 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 DEFB128Q7Z7B8 93 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 PGBD3Q8N328 593 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 GLIS3Q8NEA6 775 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.54
USP6NL-201ENST00000277575 PKP3Q9Y446 797 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 UBIAD1Q9Y5Z9 338 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
USP6NL-201ENST00000277575 CYP3A7-CYP3A51PA0A087WV96 503 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms