RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 AGAP3Q96P47 875 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CNPY3Q9BT09 278 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 MTG1Q9BT17 334 aaPredicted RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 MYH9P35579 1960 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 IGF2BP3O00425 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 AP1G2O75843 785 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 PIAS1O75925 651 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 UPP2O95045 317 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 MDH1P40925 334 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 OR1G1P47890 313 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SCNN1GP51170 649 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 IRX4P78413 519 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SARNPP82979 210 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 ZNF844Q08AG5 666 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 MMRN1Q13201 1228 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CNGA2Q16280 664 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 TTMPQ5BVD1 217 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 HEATR6Q6AI08 1181 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 NETO2Q8NC67 525 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 RNF139Q8WU17 664 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 ELAC2Q9BQ52 826 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 RSAD1Q9HA92 442 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 DDX43Q9NXZ2 648 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 STYXL1Q9Y6J8 313 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 TMEM191CA6NGB0 347 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 M0QYT0 321 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SOCS7O14512 581 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 PPEF2O14830 753 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 PMM2O15305 246 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SHBGP04278 402 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 ERBB2P04626 1255 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CYP1A1P04798 512 aaPredicted RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 NCAM1P13591 858 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 HOXD10P28358 340 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 CTCFP49711 727 aaPredicted RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 TSPY1Q01534 308 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 WSCD1Q658N2 575 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 THEM5Q8N1Q8 247 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 DDX1Q92499 740 aaKnown RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 KLF6Q99612 283 aaPredicted RBP9.41□□□□□ -0.9
SEC16A-201ENST00000277537 APBA2Q99767 749 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 PTPN18Q99952 460 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 MAF1Q9H063 256 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 KLC2Q9H0B6 622 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 ST3GAL5Q9UNP4 418 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 C2CD2Q9Y426 696 aa9.41□□□□□ -0.9
SEC16A-201ENST00000277537 SMIM28A0A1B0GU29 152 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 A0A1B0GUA9 196 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 CLDN5O00501 218 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 HMGCRP04035 888 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 FAM200BP0CF97 657 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 LSP1P33241 339 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 GRIK1P39086 918 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PNPLA4P41247 253 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 GRM5P41594 1212 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 ASPAP45381 313 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 ADIGQ0VDE8 80 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 TAF5Q15542 800 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PLEKHA7Q6IQ23 1121 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 TAF2Q6P1X5 1199 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PDZD4Q76G19 769 aaPredicted RBP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 C4orf33Q8N1A6 199 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PPM1NQ8N819 430 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 KLHL8Q9P2G9 620 aaPredicted RBP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 XPO7Q9UIA9 1087 aaKnown RBP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 KIAA1257Q9ULG3 409 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 SIGLEC16A6NMB1 481 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 HCRTO43612 131 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 CHN1P15882 459 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PEX5P50542 639 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 DEUP1Q05D60 604 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 GRB14Q14449 540 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PTGISQ16647 500 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 DUPD1Q68J44 220 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 KIAA1841Q6NSI8 718 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 LRIG3Q6UXM1 1119 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 RNF180Q86T96 592 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 NDRG1Q92597 394 aaKnown RBP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 EDEM1Q92611 657 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 MS4A4AQ96JQ5 239 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 PLCD4Q9BRC7 762 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 SLC38A7Q9NVC3 462 aa9.4□□□□□ -0.9
SEC16A-201ENST00000277537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.4□□□□□ -0.9
SEC16A-201ENST00000277537 CCDC78A2IDD5 438 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 NDC80O14777 642 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 GPR182O15218 404 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 CILPO75339 1184 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 RARGP13631 454 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.91
SEC16A-201ENST00000277537 BCAT1P54687 386 aa9.4□□□□□ -0.91
SEC16A-201ENST00000277537 ARL13BQ3SXY8 428 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms