RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 MAGEB3O15480 346 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RNGTTO60942 597 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PGM3O95394 542 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 OLFM2O95897 454 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 MBP02144 154 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ASLP04424 464 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SRGAP2BP0DMP2 458 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 TTKP33981 857 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 S100A12P80511 92 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PCDH1Q08174 1060 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 FRG1Q14331 258 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 NFE2Q16621 373 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RTP2Q5QGT7 225 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 KDM7AQ6ZMT4 941 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 C12orf56Q8IXR9 622 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SLC38A6Q8IZM9 456 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PTCD2Q8WV60 388 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SCFD1Q8WVM8 642 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ZDHHC12Q96GR4 267 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PAQR5Q9NXK6 330 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 NOC2LQ9Y3T9 749 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 SOWAHDA6NJG2 315 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PGRP06401 933 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 KRT15P19012 456 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ALDH6A1Q02252 535 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 RELAQ04206 551 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 CDK18Q07002 472 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF674Q2M3X9 581 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 DALRD3Q5D0E6 543 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF677Q86XU0 584 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 TPH2Q8IWU9 490 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ATAD1Q8NBU5 361 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 HUS1BQ8NHY5 278 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 MEIS3Q99687 375 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 APOL2Q9BQE5 337 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PHF20Q9BVI0 1012 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 MLXQ9UH92 298 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 VPS28Q9UK41 221 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PCDHGA2Q9Y5H1 932 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 TRIM3O75382 744 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 GPC4O75487 556 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF202O95125 648 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 RB1P06400 928 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 GATMP50440 423 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 FAM47CQ5HY64 1035 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 DPPA2Q7Z7J5 298 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ZBTB44Q8NCP5 570 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 TTLQ8NG68 377 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ANKS1AQ92625 1134 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PHF12Q96QT6 1004 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ELAC2Q9BQ52 826 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 HGH1Q9BTY7 390 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 SESN1Q9Y6P5 492 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 C3P01024 1663 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 RGPD8O14715 1765 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 GPR89AB7ZAQ6 455 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 DYNC1LI2O43237 492 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 GPR89BP0CG08 455 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ANXA8P13928 327 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 TNNI1P19237 187 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ALDH4A1P30038 563 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 SCTRP47872 440 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 HABP2Q14520 560 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 EPHA7Q15375 998 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PTGISQ16647 500 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 TDRD12Q587J7 1177 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ANXA8L1Q5VT79 327 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ETFRF1Q6IPR1 90 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 LIN54Q6MZP7 749 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 KRT73Q86Y46 540 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 PSPC1Q8WXF1 523 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 EME1Q96AY2 570 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 FAM20AQ96MK3 541 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 RBM42Q9BTD8 480 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ABCC4O15439 1325 aa9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 ATXN2Q99700 1313 aaKnown RBP9.24□□□□□ -0.93
CTDSPL-201ENST00000273179 NDUFS8O00217 210 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 SCAMP2O15127 329 aaKnown RBP9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 FOXP2O15409 715 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 GMFGO60234 142 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 TNFRSF21O75509 655 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 PABPC4LP0CB38 370 aaKnown RBP9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 ITGA2P17301 1181 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 EIF4A3P38919 411 aaKnown RBP9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 NUBP1P53384 320 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF33BQ06732 778 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 CUL4AQ13619 759 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 PM20D2Q8IYS1 436 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 TGFBRAP1Q8WUH2 860 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 STK33Q9BYT3 514 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 INIPQ9NRY2 104 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 GMEB2Q9UKD1 530 aa9.23□□□□□ -0.93
CTDSPL-201ENST00000273179 TECPR2O15040 1411 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms