RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 CCSER1Q9C0I3 900 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 NRDE2Q9H7Z3 1164 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 POLR1BQ9H9Y6 1135 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 PALLDQ8WX93 1383 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 CAPZA2P47755 286 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 CHN2P52757 468 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 DEFB115Q30KQ5 88 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 KCNT1Q5JUK3 1230 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 RAB42Q8N4Z0 105 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 WDR36Q8NI36 951 aaKnown RBP10.95□□□□□ -0.66
OTOF-201ENST00000272371 ROGDIQ9GZN7 287 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 ATXN10Q9UBB4 475 aa10.95□□□□□ -0.66
OTOF-201ENST00000272371 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
OTOF-201ENST00000272371 A0A087WXM4 84 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 EFCAB10A6NFE3 127 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 MEI4A8MW99 385 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TM9SF1O15321 606 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 PGK2P07205 417 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 ADORA2BP29275 332 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 EPHB2P29323 1055 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 CYP51A1Q16850 503 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SGO1Q5FBB7 561 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SEL1L3Q68CR1 1132 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 BTN2A1Q7KYR7 527 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 COMMD3-BMI1R4GMX3 469 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SMIM31A0A1B0GVY4 71 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 UCHL3P15374 230 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 FNTAP49354 379 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 EPS8Q12929 822 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 NFYCQ13952 458 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 MAPK6Q16659 721 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 MIGA2Q7L4E1 593 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
OTOF-201ENST00000272371 VPS37AQ8NEZ2 397 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 BEST2Q8NFU1 509 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 PIGUQ9H490 435 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 WHRNQ9P202 907 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TFR2Q9UP52 801 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 GDF11O95390 407 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 IL6STP40189 918 aaPredicted RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 MAPK7Q13164 816 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TYW3Q6IPR3 259 aaKnown RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 ZFP1Q6P2D0 407 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 FOXR1Q6PIV2 292 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 CHMP1BQ7LBR1 199 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TCAIMQ8N3R3 496 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SH3TC2Q8TF17 1288 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 COMMD8Q9NX08 183 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 NR5A2O00482 541 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 PGM3O95394 542 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 RAD23AP54725 363 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 HPCAP84074 193 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SHROOM1Q2M3G4 852 aaPredicted RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 SPATA18Q8TC71 538 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 DCUN1D1Q96GG9 259 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SLC39A10Q9ULF5 831 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 PTCH1Q13635 1447 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 E9PBE3 544 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 P4HBP07237 508 aaKnown RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 FEN1P39748 380 aaKnown RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 CSNK2BP67870 215 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 FUKQ8N0W3 1084 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 AFG1LQ8WV93 481 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 SIK2Q9H0K1 926 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 ATP6V1HQ9UI12 483 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 EIF3LQ9Y262 564 aaKnown RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 PDS5AQ29RF7 1337 aaKnown RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 CYP2E1P05181 493 aaPredicted RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 SERPIND1P05546 499 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 PTPN7P35236 360 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 HSD17B4P51659 736 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 MZT2BQ6NZ67 158 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 C4orf22Q6V702 233 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 MIER2Q8N344 545 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 TTC39CQ8N584 583 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 USP13Q92995 863 aaPredicted RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 PLEKHA5Q9HAU0 1116 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 RBAKQ9NYW8 714 aaPredicted RBP10.94□□□□□ -0.66
OTOF-201ENST00000272371 SH3GLB1Q9Y371 365 aa10.94□□□□□ -0.66
OTOF-201ENST00000272371 CCDC182A6NF36 153 aa10.93□□□□□ -0.66
OTOF-201ENST00000272371 CCT8P50990 548 aa10.93□□□□□ -0.66
OTOF-201ENST00000272371 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
OTOF-201ENST00000272371 TDRD5Q8NAT2 981 aaKnown RBP10.93□□□□□ -0.66
OTOF-201ENST00000272371 FNIP1Q8TF40 1166 aa10.93□□□□□ -0.66
OTOF-201ENST00000272371 C18orf8Q96DM3 657 aa10.93□□□□□ -0.66
OTOF-201ENST00000272371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
OTOF-201ENST00000272371 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
OTOF-201ENST00000272371 HEATR9A2RTY3 570 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms