RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 ATP8B3O60423 1300 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 ZBTB39O15060 712 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 OGTO15294 1046 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 ATP6V1B1P15313 513 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 CDC25CP30307 473 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 NUDT2P50583 147 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 NIPA1Q7RTP0 329 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 SHCBP1LQ9BZQ2 653 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 PSMD3O43242 534 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 NME3Q13232 169 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 C15orf52Q6ZUT6 534 aaKnown RBP12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 RNF139Q8WU17 664 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 PSMD10O75832 226 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 LCP1P13796 627 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 FMO1Q01740 532 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 NFIL3Q16649 462 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 ATF7IP2Q5U623 682 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 TNIP3Q96KP6 325 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 SRPK1Q96SB4 655 aaKnown RBP12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 TBC1D23Q9NUY8 699 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 KCNK4Q9NYG8 393 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 PKD2L2Q9NZM6 624 aa12.64□□□□□ -0.39
RHBDL3-201ENST00000269051 ABCC6O95255 1503 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 DISP2A7MBM2 1401 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 C3orf70A6NLC5 250 aaPredicted RBP12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 ABLIM1O14639 778 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 CLPTM1O96005 669 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 TMEM132DQ14C87 1099 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 PCYOX1LQ8NBM8 494 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 CISHQ9NSE2 258 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 USP18Q9UMW8 372 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 AFDNP55196 1824 aaKnown RBP12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 ADGRA3Q8IWK6 1321 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 ARHGEF37A1IGU5 675 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 C2CD2LO14523 706 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 DCPSQ96C86 337 aaKnown RBP12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 HSD17B14Q9BPX1 270 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 KRT82Q9NSB4 513 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 THAP1Q9NVV9 213 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 SDR42E2A6NKP2 422 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 AKAP10O43572 662 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 PRAMEP78395 509 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 UBA3Q8TBC4 463 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 ZBTB18Q99592 522 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
RHBDL3-201ENST00000269051 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 ENTPD5O75356 428 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 H2AFYO75367 372 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 HDAC4P56524 1084 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 STX5Q13190 355 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 ZNF268Q14587 947 aaPredicted RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 VPS72Q15906 364 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 LRRC38Q5VT99 294 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 TRABD2AQ86V40 505 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 ZNF560Q96MR9 790 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 CPSF3Q9UKF6 684 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 RALBP11234 206 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 JAM2P57087 298 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 TPI1P60174 286 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 GTF2BQ00403 316 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 TTLL4Q14679 1199 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 MYLK4Q86YV6 388 aaPredicted RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 WDR49Q8IV35 697 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 TFB1MQ8WVM0 346 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 EPAS1Q99814 870 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 MTMR12Q9C0I1 747 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 KIAA1257Q9ULG3 409 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 ANGPT2O15123 496 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 SULT1E1P49888 294 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 R3HDM1Q15032 1099 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 FAM49AQ9H0Q0 323 aaPredicted RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 LIASO43766 372 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 GAS2O43903 313 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 VDRP11473 427 aa12.62□□□□□ -0.39
RHBDL3-201ENST00000269051 TSHRP16473 764 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms