RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 UBR7Q8N806 425 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 SCG3Q8WXD2 468 aaKnown RBP17.85■□□□□ 0.45
SPG7-201ENST00000268704 HSPH1Q92598 858 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 NSL1Q96IY1 281 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 NMUR2Q9GZQ4 415 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 VPS11Q9H270 941 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 SPATS2LQ9NUQ6 558 aaKnown RBP17.85■□□□□ 0.45
SPG7-201ENST00000268704 PGAP2Q9UHJ9 254 aa17.85■□□□□ 0.45
SPG7-201ENST00000268704 RTP1P59025 263 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 CDK16Q00536 496 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 RCN2Q14257 317 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 PRPF39Q86UA1 669 aaKnown RBP17.84■□□□□ 0.45
SPG7-201ENST00000268704 ZC3H18Q86VM9 953 aaKnown RBP17.84■□□□□ 0.45
SPG7-201ENST00000268704 PHC3Q8NDX5 983 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 LRRN4Q8WUT4 740 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 DDX56Q9NY93 547 aaKnown RBP17.84■□□□□ 0.45
SPG7-201ENST00000268704 CCDC195A0A1B0GUA6 201 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 STAM2O75886 525 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 ASS1P00966 412 aaKnown RBP17.84■□□□□ 0.45
SPG7-201ENST00000268704 ETV4P43268 484 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 RAP1GAPP47736 663 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 RNF220Q5VTB9 566 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 AP1ARQ63HQ0 302 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 ABHD15Q6UXT9 468 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 PDIK1LQ8N165 341 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 RDM1Q8NG50 284 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 ZNF398Q8TD17 642 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 GPRASP2Q96D09 838 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 STOML1Q9UBI4 398 aa17.84■□□□□ 0.45
SPG7-201ENST00000268704 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.84■□□□□ 0.45
SPG7-201ENST00000268704 VWA5AO00534 786 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 AMPD1P23109 780 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 PTPN7P35236 360 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 VHLP40337 213 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 TGFB2P61812 414 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 YWHAGP61981 247 aaKnown RBP eCLIP17.83■□□□□ 0.453e-6■■■□□ 16.4
SPG7-201ENST00000268704 MMRN1Q13201 1228 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 PRKD1Q15139 912 aaPredicted RBP17.83■□□□□ 0.45
SPG7-201ENST00000268704 NBPF20Q3BBV1 942 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 PCGF5Q86SE9 256 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 RFX6Q8HWS3 928 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 FAM136AQ96C01 138 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 CALN1Q9BXU9 219 aa17.83■□□□□ 0.45
SPG7-201ENST00000268704 ADGRA2Q96PE1 1338 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 E7ESA3 106 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 FCHO1O14526 889 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 ESRRAP11474 423 aaPredicted RBP17.83■□□□□ 0.44
SPG7-201ENST00000268704 KDELR1P24390 212 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 MRPS35P82673 323 aaKnown RBP17.83■□□□□ 0.44
SPG7-201ENST00000268704 ENPEPQ07075 957 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 RAB6CQ53S08 254 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 LPAR1Q92633 364 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 RAB6CQ9H0N0 254 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 PPCSQ9HAB8 311 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 ARHGEF4Q9NR80 690 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 MAP3K6O95382 1288 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 PSMG1O95456 288 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 CD19P15391 556 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 NEK3P51956 506 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 EIF3EP60228 445 aaKnown RBP17.83■□□□□ 0.44
SPG7-201ENST00000268704 THOC5Q13769 683 aaKnown RBP17.83■□□□□ 0.44
SPG7-201ENST00000268704 SPDYAQ5MJ70 313 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 SNRNP48Q6IEG0 339 aaKnown RBP17.83■□□□□ 0.44
SPG7-201ENST00000268704 CFAP36Q96G28 342 aa17.83■□□□□ 0.44
SPG7-201ENST00000268704 MARCOQ9UEW3 520 aaPredicted RBP17.83■□□□□ 0.44
SPG7-201ENST00000268704 TNS1Q9HBL0 1735 aaKnown RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 KRT3P12035 628 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 SP100P23497 879 aaPredicted RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 CES4AQ5XG92 561 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 CIAPIN1Q6FI81 312 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 LRRC74BQ6ZQY2 392 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 KBTBD2Q8IY47 623 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 OXNAD1Q96HP4 312 aaPredicted RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 APOPT1Q96IL0 206 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 CLPTM1LQ96KA5 538 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 PORCNQ9H237 461 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 COL11A1P12107 1806 aaPredicted RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 WNT10BO00744 389 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 SMIM24O75264 130 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 DHRS4L1P0CG22 281 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 KITP10721 976 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 RBP3P10745 1247 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 BAG6P46379 1132 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 FSTL1Q12841 308 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 XKR3Q5GH77 459 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 FAXCQ5TGI0 409 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 BBS12Q6ZW61 710 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 ZNF668Q96K58 619 aaPredicted RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 CYTH2Q99418 400 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 TRIM56Q9BRZ2 755 aaKnown RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 PPP1R12CQ9BZL4 782 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 NXF1Q9UBU9 619 aaKnown RBP17.82■□□□□ 0.44
SPG7-201ENST00000268704 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 IKBKGQ9Y6K9 419 aa17.82■□□□□ 0.44
SPG7-201ENST00000268704 H3BRJ5 948 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 INHBAP08476 426 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 OSTNP61366 133 aa17.81■□□□□ 0.44
SPG7-201ENST00000268704 TREML1Q86YW5 311 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms