RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TEDDM1Q5T9Z0 273 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 DUPD1Q68J44 220 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 DSTYKQ6XUX3 929 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 NUP93Q8N1F7 819 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 ETNPPLQ8TBG4 499 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 ANKRD27Q96NW4 1050 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 C10orf88Q9H8K7 445 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 TGFB1I1O43294 461 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 GJB6O95452 261 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 FAM200BP0CF97 657 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 LCP1P13796 627 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 GSTT1P30711 240 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 NME3Q13232 169 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 R3HDM1Q15032 1099 aaKnown RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 CCNG2Q16589 344 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 TRMT5Q32P41 509 aaKnown RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 EFHC1Q5JVL4 640 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 ACTL9Q8TC94 416 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 STAP1Q9ULZ2 295 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 E9PBE3 544 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 KLHL41O60662 606 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 PSMD10O75832 226 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 CYP3A4P08684 503 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 MMP13P45452 471 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 ATF7IP2Q5U623 682 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 DEFB107AQ8IZN7 70 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 SGF29Q96ES7 293 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 RSAD1Q9HA92 442 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 ERVK-5Q9HDB9 667 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 FAM49BQ9NUQ9 324 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 TAGLN3Q9UI15 199 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 CORO1CQ9ULV4 474 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 ANGPTL3Q9Y5C1 460 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 C19orf81C9J6K1 198 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 RPL10AP62906 217 aaKnown RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 PLOD1Q02809 727 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-201ENST00000267199 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 EXD1Q8NHP7 514 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 AP5M1Q9H0R1 490 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 TASP1Q9H6P5 420 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 CASZ1Q86V15 1759 aa12.01□□□□□ -0.49
VPS33A-201ENST00000267199 PSMG1O95456 288 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 NUDT17P0C025 328 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 ANGEL2Q5VTE6 544 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 ZCCHC23Q6ZST2 131 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 ZNF786Q8N393 782 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 MRPL1Q9BYD6 325 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 KLHL4Q9C0H6 718 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 IL10P22301 178 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 PMLP29590 882 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 PPM1FP49593 454 aaPredicted RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 DAB2P98082 770 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 TMPRSS6Q8IU80 811 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 DDIASQ8IXT1 998 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 KIAA2013Q8IYS2 634 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 CDC26Q8NHZ8 85 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 PURBQ96QR8 312 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 HSD17B14Q9BPX1 270 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 STAU2Q9NUL3 570 aaKnown RBP eCLIP12□□□□□ -0.49
VPS33A-201ENST00000267199 ANKRD63C9JTQ0 380 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 RBP5P82980 135 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 ROR2Q01974 943 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 KCTD21Q4G0X4 260 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 TFDP3Q5H9I0 405 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 IER5Q5VY09 327 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 FOXR2Q6PJQ5 311 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 PPP2R3CQ969Q6 453 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 GFM2Q969S9 779 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 SHISA4Q96DD7 197 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 OXNAD1Q96HP4 312 aaPredicted RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 SIKE1Q9BRV8 207 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 MRPL40Q9NQ50 206 aaKnown RBP12□□□□□ -0.49
VPS33A-201ENST00000267199 CLIC5Q9NZA1 410 aa12□□□□□ -0.49
VPS33A-201ENST00000267199 RASSF9O75901 435 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PGM3O95394 542 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 MAPTP10636 758 aaKnown RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 TMEM132DQ14C87 1099 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 RNF220Q5VTB9 566 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 METTL23Q86XA0 190 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 ABRAQ8N0Z2 381 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 EMC1Q8N766 993 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 HES6Q96HZ4 224 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 MMP19Q99542 508 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 GCOM2Q9BZD3 368 aaPredicted RBP11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 PAK5Q9P286 719 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 SLC24A2Q9UI40 661 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 DNPEPQ9ULA0 475 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 BTNL10A8MVZ5 291 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 RBAK-RBAKDNI3L0D1 243 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 OGTO15294 1046 aa11.99□□□□□ -0.49
VPS33A-201ENST00000267199 AHCYL1O43865 530 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms