RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RAB6BQ9NRW1 208 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 IQANK1A0A1B0GTG1 560 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 E5RJQ4 531 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 TOP3BO95985 862 aaKnown RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ITGAVP06756 1048 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 KCNA3P22001 575 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 AMPD1P23109 780 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 IRX1P78414 480 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 MCL1Q07820 350 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 PIGHQ14442 188 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 RASA2Q15283 850 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 PTPN20Q4JDL3 420 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 RELL1Q8IUW5 271 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 LRRC71Q8N4P6 559 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 FBXO27Q8NI29 283 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 NTPCRQ9BSD7 190 aaKnown RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ACSS3Q9H6R3 686 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 SMYD3Q9H7B4 428 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ZNF302Q9NR11 478 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 PCMTD2Q9NV79 361 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 TCRBV9S1A1TA0A576 114 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 CLGNO14967 610 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 TBX10O75333 385 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 LRCH4O75427 683 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 CDH6P55285 790 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 RAB6CQ53S08 254 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 BSPRYQ5W0U4 402 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 CDCA2Q69YH5 1023 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 LRRC74BQ6ZQY2 392 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 PCGF5Q86SE9 256 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 PRPF39Q86UA1 669 aaKnown RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 CEP120Q8N960 986 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 BANPQ8N9N5 519 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 DCAKDQ8WVC6 231 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ZCWPW1Q9H0M4 648 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 RAB6CQ9H0N0 254 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 C17orf75Q9HAS0 396 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 TAS2R1Q9NYW7 299 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 USP1O94782 785 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 KCNA2P16389 499 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 CDK16Q00536 496 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ADGRD1Q6QNK2 874 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 VSIG10LQ86VR7 867 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 PIH1D1Q9NWS0 290 aaKnown RBP12.95□□□□□ -0.34
CHMP3-201ENST00000263856 LRRC42Q9Y546 428 aa12.95□□□□□ -0.34
CHMP3-201ENST00000263856 ARHGAP42A6NI28 874 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 UGT1A9O60656 530 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 DKC1O60832 514 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 RNF8O76064 485 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 PSMG1O95456 288 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 APRTP07741 180 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SKIP12755 728 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 KDELR1P24390 212 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 HMGCS2P54868 508 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 BIRC2Q13490 618 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 CHI3L2Q15782 390 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 ISLR2Q6UXK2 745 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 CDHR3Q6ZTQ4 885 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 KIAA0319LQ8IZA0 1049 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 TEX9Q8N6V9 391 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 NRG4Q8WWG1 115 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 OXNAD1Q96HP4 312 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 UGT1A7Q9HAW7 530 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 UGT1A10Q9HAW8 530 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 UGT1A8Q9HAW9 530 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SYNPO2Q9UMS6 1093 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 DRG1Q9Y295 367 aaKnown RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 VWA5AO00534 786 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 WNT10BO00744 389 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 KCNN4O15554 427 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 TOM1L1O75674 476 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 AP1G2O75843 785 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 RGS20O76081 388 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 EGFRP00533 1210 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SERPINB4P48594 390 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SATB1Q01826 763 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 FSTL1Q12841 308 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 ZRSR2Q15696 482 aaKnown RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 XKR3Q5GH77 459 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 FAM102AQ5T9C2 384 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 MROH9Q5TGP6 573 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SLFN12LQ6IEE8 588 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 NAT8LQ8N9F0 302 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SLC35B2Q8TB61 432 aa12.94□□□□□ -0.34
CHMP3-201ENST00000263856 NSUN6Q8TEA1 469 aaKnown RBP12.94□□□□□ -0.34
CHMP3-201ENST00000263856 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms