RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 BLOC1S5Q8TDH9 187 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 MIEF2Q96C03 454 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 CBWD1Q9BRT8 395 aa12.5□□□□□ -0.41
SMG6-201ENST00000263073 H2AFY2Q9P0M6 372 aaPredicted RBP12.5□□□□□ -0.41
SMG6-201ENST00000263073 RIPK2O43353 540 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 RAG1P15918 1043 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 AP3M2P53677 418 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 TRAF2Q12933 501 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 URGCPQ8TCY9 931 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 MZF1P28698 734 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 FNTAP49354 379 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 DENND1BQ6P3S1 775 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 SAPCD2Q86UD0 394 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 PACSIN3Q9UKS6 424 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 PLA2R1Q13018 1463 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 DGAT1O75907 488 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 ENDOD1O94919 500 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 RRM1P23921 792 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 CYP2R1Q6VVX0 501 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 ZKSCAN4Q969J2 545 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 ZNF560Q96MR9 790 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 NOL6Q9H6R4 1146 aaKnown RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 GPRC5DQ9NZD1 345 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 CLASP2O75122 1294 aaKnown RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 LGR5O75473 907 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 ZNF682O95780 498 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 RARGP13631 454 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 CYP11B2P19099 503 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 ATF7IP2Q5U623 682 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 SLC5A5Q92911 643 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 NDEL1Q9GZM8 345 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 TRIM45Q9H8W5 580 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 SLC30A1Q9Y6M5 507 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 RFX3P48380 749 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 NFYCQ13952 458 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 UGP2Q16851 508 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 TTI2Q6NXR4 508 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 CES3Q6UWW8 571 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 PRUNE1Q86TP1 453 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 PYDC1Q8WXC3 89 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 MTMR12Q9C0I1 747 aa12.49□□□□□ -0.41
SMG6-201ENST00000263073 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
SMG6-201ENST00000263073 UNC13BO14795 1591 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CYP11B1P15538 503 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 MSH4O15457 936 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 EXTL3O43909 919 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 GJB6O95452 261 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 NNMTP40261 264 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 EFNA5P52803 228 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CUL2Q13617 745 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 PDK1Q15118 436 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 ZBTB49Q6ZSB9 765 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 STRA8Q7Z7C7 330 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CENPLQ8N0S6 344 aaPredicted RBP12.48□□□□□ -0.41
SMG6-201ENST00000263073 COQ7Q99807 217 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 WDR35Q9P2L0 1181 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CDC42BPGQ6DT37 1551 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CALCAP01258 141 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 THRAP10827 490 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CHRNA5P30532 468 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■□□ 14.9
SMG6-201ENST00000263073 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 OPTNQ96CV9 577 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 MED15Q96RN5 788 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 KCNH7Q9NS40 1196 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 RNF112Q9ULX5 631 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 C15orf41Q9Y2V0 281 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 M0QYT0 321 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 FAM200BP0CF97 657 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 WASHC5Q12768 1159 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
SMG6-201ENST00000263073 CDC42EP5Q6NZY7 148 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 TBX20Q9UMR3 447 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 CRB1P82279 1406 aa12.48□□□□□ -0.41
SMG6-201ENST00000263073 TRPC5OSA6NMA1 111 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 EPB42P16452 691 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 PSMB9P28065 219 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 PPATQ06203 517 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 RIPOR1Q6ZS17 1223 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms