RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 DEPTORQ8TB45 409 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 OXNAD1Q96HP4 312 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-201ENST00000262395 CYTH2Q99418 400 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 PIK3R2O00459 728 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 CYB561D2O14569 222 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 TM9SF1O15321 606 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 RGS20O76081 388 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 CALB1P05937 261 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 ASNSP08243 561 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 INHBAP08476 426 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 MMRN1Q13201 1228 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 DENND1BQ6P3S1 775 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 SHKBP1Q8TBC3 707 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 ZNF668Q96K58 619 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-201ENST00000262395 TRIM56Q9BRZ2 755 aaKnown RBP18.79■□□□□ 0.6
TRAF4-201ENST00000262395 IMPG2Q9BZV3 1241 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 CISHQ9NSE2 258 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 ETAA1Q9NY74 926 aa18.79■□□□□ 0.6
TRAF4-201ENST00000262395 TCRBV5S1A1TA0A578 114 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 LRCH4O75427 683 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 STAM2O75886 525 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 KCNA3P22001 575 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 NEK3P51956 506 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 EIF3EP60228 445 aaKnown RBP18.78■□□□□ 0.6
TRAF4-201ENST00000262395 ACTR2P61160 394 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 PRKD1Q15139 912 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-201ENST00000262395 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 TREML1Q86YW5 311 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 PPM1NQ8N819 430 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 TMEM35BQ8NCS4 154 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 DHRS4Q9BTZ2 278 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 C17orf75Q9HAS0 396 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 PPARGC1AQ9UBK2 798 aaKnown RBP18.78■□□□□ 0.6
TRAF4-201ENST00000262395 PLSCR1O15162 318 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 ZCCHC18P0CG32 403 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 TBXAS1P24557 533 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-201ENST00000262395 PAPOLAP51003 745 aaKnown RBP18.78■□□□□ 0.6
TRAF4-201ENST00000262395 IRX4P78413 519 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 MTMR2Q13614 643 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 BMPR2Q13873 1038 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 PIGHQ14442 188 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-201ENST00000262395 RAB6CQ53S08 254 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 CCNJLQ8IV13 435 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 KCTD6Q8NC69 237 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 ATG4CQ96DT6 458 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 RAB6CQ9H0N0 254 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 SYNCQ9H7C4 482 aa18.78■□□□□ 0.6
TRAF4-201ENST00000262395 LGR5O75473 907 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 PSAPP07602 524 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 RBP3P10745 1247 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 RAP1GAPP47736 663 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 OSTNP61366 133 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 PCGF5Q86SE9 256 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 ZNF398Q8TD17 642 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 CGRRF1Q99675 332 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 DDX56Q9NY93 547 aaKnown RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 NXF1Q9UBU9 619 aaKnown RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 MTO1Q9Y2Z2 717 aaKnown RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 THSD7AQ9UPZ6 1657 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 CNTNAP2Q9UHC6 1331 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 TRIM49D1C9J1S8 452 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 UGT1A9O60656 530 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 USP1O94782 785 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 BAG2O95816 211 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 KRT3P12035 628 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 SKIP12755 728 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 KDELR1P24390 212 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 ETV4P43268 484 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 SERPINB4P48594 390 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 ZNF200P98182 395 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 LRRC38Q5VT99 294 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 FOXB2Q5VYV0 432 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 CES4AQ5XG92 561 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 ARID3BQ8IVW6 561 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 ACAP3Q96P50 834 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 TTC1Q99614 292 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 IQCGQ9H095 443 aaKnown RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 UGT1A7Q9HAW7 530 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 UGT1A10Q9HAW8 530 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 UGT1A8Q9HAW9 530 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 JPH1Q9HDC5 661 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-201ENST00000262395 ARHGEF4Q9NR80 690 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 CYTH4Q9UIA0 394 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 SCOCQ9UIL1 159 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 LRCH1Q9Y2L9 728 aa18.77■□□□□ 0.6
TRAF4-201ENST00000262395 SNUPNO95149 360 aaKnown RBP18.77■□□□□ 0.59
TRAF4-201ENST00000262395 TOP3BO95985 862 aaKnown RBP18.77■□□□□ 0.59
TRAF4-201ENST00000262395 KCNA2P16389 499 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 CACNA2D1P54289 1103 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 PTPN20Q4JDL3 420 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 PPP1R15BQ5SWA1 713 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 OR52E8Q6IFG1 317 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 CDR2LQ86X02 465 aaPredicted RBP18.77■□□□□ 0.59
TRAF4-201ENST00000262395 SSU72Q9NP77 194 aaKnown RBP18.77■□□□□ 0.59
TRAF4-201ENST00000262395 KRT82Q9NSB4 513 aa18.77■□□□□ 0.59
TRAF4-201ENST00000262395 PCNTO95613 3336 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms