RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 TSPYL2Q9H2G4 693 aaPredicted RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 CNOT8Q9UFF9 292 aaKnown RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZNF232Q9UNY5 417 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 GRID2IPA4D2P6 1211 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 XPOTO43592 962 aaKnown RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 GBP1P32455 592 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 CUL2Q13617 745 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 TDRD12Q587J7 1177 aaKnown RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZNF598Q86UK7 904 aaKnown RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 SEPT8Q92599 483 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 TAF4BQ92750 862 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 MMADHCQ9H3L0 296 aaPredicted RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 FNDC1Q4ZHG4 1894 aaPredicted RBP19.89■□□□□ 0.78
COL4A3BP-201ENST00000261415 ARL5CA6NH57 179 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 EN2P19622 333 aaPredicted RBP19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 TBXAS1P24557 533 aaPredicted RBP19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 PRKCIP41743 596 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 RBP5P82980 135 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 KLHL30Q0D2K2 578 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 CUL1Q13616 776 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 MAIP1Q8WWC4 291 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 APBB2Q92870 758 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 PPP1R10Q96QC0 940 aaKnown RBP19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 RPS6KC1Q96S38 1066 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 NIF3L1Q9GZT8 377 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 ZWILCHQ9H900 591 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 RSAD1Q9HA92 442 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 NOVA2Q9UNW9 492 aaKnown RBP19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 CAPN6Q9Y6Q1 641 aa19.89■□□□□ 0.77
COL4A3BP-201ENST00000261415 CXCL10P02778 98 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 ATICP31939 592 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 AFF1P51825 1210 aaKnown RBP19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 KLC1Q07866 573 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 FAM133BQ5BKY9 247 aaKnown RBP19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 CCDC42Q96M95 316 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 ZNF317Q96PQ6 595 aaPredicted RBP19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 NSRP1Q9H0G5 558 aaKnown RBP19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 RAB17Q9H0T7 212 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 ESYT3A0FGR9 886 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 ATP6V1C1P21283 382 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 PCK1P35558 622 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 EIF4A3P38919 411 aaKnown RBP19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 NCALDP61601 193 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 KCNJ2P63252 427 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 SOX4Q06945 474 aaPredicted RBP19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 UBE2Q1Q7Z7E8 422 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 FAM71AQ8IYT1 594 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 HPDLQ96IR7 371 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 ISCUQ9H1K1 167 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 VRTNQ9H8Y1 702 aa19.88■□□□□ 0.77
COL4A3BP-201ENST00000261415 SSU72P8A0A1W2PR75 194 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 GSTA2P09210 222 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 CYP3A5P20815 502 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 MSH2P43246 934 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 TCTN1Q2MV58 587 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 WDR72Q3MJ13 1102 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 ZNF667Q5HYK9 610 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 TRIM68Q6AZZ1 485 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 FBF1Q8TES7 1133 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 KLHL29Q96CT2 875 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 GOLGA2P5Q9HBQ8 144 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 UBN1Q9NPG3 1134 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 DNAAF2Q9NVR5 837 aaKnown RBP19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 MIOSQ9NXC5 875 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 BZW2Q9Y6E2 419 aaKnown RBP19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 PPEF2O14830 753 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 STAU1O95793 577 aaKnown RBP19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 EOMESO95936 686 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 CXCR5P32302 372 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 ASPAP45381 313 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 SCNN1GP51170 649 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 MAGOHP61326 146 aaKnown RBP19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 FAM189BP81408 668 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 PTK2Q05397 1052 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 C9orf57Q5W0N0 161 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 MAGOHBQ96A72 148 aaKnown RBP19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 PIDD1Q9HB75 910 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 ARHGEF3Q9NR81 526 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 PCMTD2Q9NV79 361 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 ADAM22Q9P0K1 906 aa19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 NXF1Q9UBU9 619 aaKnown RBP19.87■□□□□ 0.77
COL4A3BP-201ENST00000261415 ECEL1O95672 775 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 PENKP01210 267 aaPredicted RBP19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 THP07101 528 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 RARAP10276 462 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 SCARA5Q6ZMJ2 495 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 DEFB128Q7Z7B8 93 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 ECT2Q9H8V3 914 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 DMAP1Q9NPF5 467 aaPredicted RBP19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 SLC38A7Q9NVC3 462 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 POLIQ9UNA4 740 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 A0A1B0GVG6 124 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 MOCS3O95396 460 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 ACO1P21399 889 aaKnown RBP19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 KIF11P52732 1056 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 TNNC1P63316 161 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 CYP27A1Q02318 531 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 NAB2Q15742 525 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms