RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PAWRQ96IZ0 340 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 C16orf45Q96MC5 204 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC2A13Q96QE2 648 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF518BQ9C0D4 1074 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SP110Q9HB58 689 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 TRPC6Q9Y210 931 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 EPN1Q9Y6I3 576 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 IVNS1ABPQ9Y6Y0 642 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 KRBA1A5PL33 1030 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 GTF2H1P32780 548 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 CTC1Q2NKJ3 1217 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 TTMPQ5BVD1 217 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 MYCT1Q8N699 235 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 CPLX3Q8WVH0 158 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ATG4AQ8WYN0 398 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 C17orf75Q9HAS0 396 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ATP13A1Q9HD20 1204 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 PCDHB2Q9Y5E7 798 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 UBE4BO95155 1302 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 TTC24A2A3L6 582 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 ITGB3P05106 788 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 GHRP10912 638 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SOX5P35711 763 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 JAK3P52333 1124 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 CCDC173Q0VFZ6 552 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 CDHR3Q6ZTQ4 885 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 PHF13Q86YI8 300 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 FAM178BQ8IXR5 827 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 KCTD17Q8N5Z5 321 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 HMGCLL1Q8TB92 370 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 NPY6RQ99463 290 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 TTC7AQ9ULT0 858 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 PCDHA13Q9Y5I0 950 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 ESYT3A0FGR9 886 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 MARCH6O60337 910 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 OAZ2O95190 189 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 GNA14O95837 355 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SCNN1GP51170 649 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 LAMC2Q13753 1193 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SDHAF4Q5VUM1 108 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 FAM217AQ8IXS0 508 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 DRC7Q8IY82 874 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 HASPINQ8TF76 798 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 HCFC1R1Q9NWW0 138 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 IMPACTQ9P2X3 320 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SEL1LQ9UBV2 794 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 AGO2Q9UKV8 859 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 MYO6Q9UM54 1294 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SNX12Q9UMY4 172 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 ARVCFO00192 962 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 OGTO15294 1046 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 NDST1P52848 882 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 ATF7IP2Q5U623 682 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 NPNTQ6UXI9 565 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 ZBTB33Q86T24 672 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 MCF2L2Q86YR7 1114 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC7A14Q8TBB6 771 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 FBXO25Q8TCJ0 367 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SH3GL2Q99962 352 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 C12orf65Q9H3J6 166 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 TRPM6Q9BX84 2022 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SETXQ7Z333 2677 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 C5orf22Q49AR2 442 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 C12orf40Q86WS4 652 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 SCUBE3Q8IX30 993 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 FAM186BQ8IYM0 893 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 NIPA2Q8N8Q9 360 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 XXYLT1Q8NBI6 393 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 DHRS4Q9BTZ2 278 aa6.02□□□□□ -1.45
TOPBP1-201ENST00000260810 KIAA1549Q9HCM3 1950 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 LINC01565O15544 149 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 ZBED4O75132 1171 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 GLDCP23378 1020 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PSMA3P25788 255 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CTNNA1P35221 906 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CRYBB1P53674 252 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CUL2Q13617 745 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PPP2R5AQ15172 486 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PIK3R6Q5UE93 754 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 RASGRP3Q8IV61 690 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 MPP5Q8N3R9 675 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CCDC33Q8N5R6 958 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 NLRP4Q96MN2 994 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CFAP57Q96MR6 1250 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 DEFB118Q96PH6 123 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 AS3MTQ9HBK9 375 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF287Q9HBT7 754 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PRR19A6NJB7 356 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 E5RJQ4 531 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 K7ENM7 598 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 DCLK1O15075 740 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 GALTP07902 379 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 MSNP26038 577 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 KCNC1P48547 511 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CARSP49589 748 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CDR2Q01850 454 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 IER5Q5VY09 327 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 KRT79Q5XKE5 535 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 TMEM207Q6UWW9 146 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 SYT10Q6XYQ8 523 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms