RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ARHGAP17Q68EM7 881 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 VSTM1Q6UX27 236 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 MAFAQ8NHW3 353 aaPredicted RBP21.9■■□□□ 1.1
RTCA-201ENST00000260563 ZDHHC7Q9NXF8 308 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.9■■□□□ 1.1
RTCA-201ENST00000260563 BRWD1Q9NSI6 2320 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 TRIM66O15016 1216 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 THAP12O43422 761 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 CALCAP01258 141 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 FAM200BP0CF97 657 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 HOXA9P31269 272 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 GRIK1P39086 918 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 ALDH1A3P47895 512 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 CDR2Q01850 454 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 TWF1Q12792 350 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 ANKRD54Q6NXT1 300 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 TOGARAM2Q6ZUX3 1019 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 PAQR9Q6ZVX9 377 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 ZNF677Q86XU0 584 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 DDX1Q92499 740 aaKnown RBP21.9■■□□□ 1.1
RTCA-201ENST00000260563 SPTLC3Q9NUV7 552 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 ADAMTS1Q9UHI8 967 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 TSPAN16Q9UKR8 245 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 EIF3CLB5ME19 914 aaKnown RBP21.89■■□□□ 1.09
RTCA-201ENST00000260563 O00370 1275 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 MED7O43513 233 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 RFPL2O75678 378 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 AP1G2O75843 785 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 SOAT2O75908 522 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 TNFAIP3P21580 790 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 GFPT1Q06210 699 aaPredicted RBP21.89■■□□□ 1.09
RTCA-201ENST00000260563 SLC18A3Q16572 532 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 GOLGA7BQ2TAP0 167 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 TAF3Q5VWG9 929 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 SCN4BQ8IWT1 228 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 TFAP2BQ92481 460 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 EIF3CQ99613 913 aaKnown RBP21.89■■□□□ 1.09
RTCA-201ENST00000260563 HESX1Q9UBX0 185 aa21.89■■□□□ 1.09
RTCA-201ENST00000260563 A0A087X0T9 212 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 MMEP08473 750 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 HNRNPA1P09651 372 aaKnown RBP eCLIP21.88■■□□□ 1.09
RTCA-201ENST00000260563 FAM228BP0C875 321 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 HOXB8P17481 243 aaPredicted RBP21.88■■□□□ 1.09
RTCA-201ENST00000260563 CHRNB2P17787 502 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 RPL10AP62906 217 aaKnown RBP21.88■■□□□ 1.09
RTCA-201ENST00000260563 OLIG1Q8TAK6 271 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 DESI2Q9BSY9 194 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 DMAP1Q9NPF5 467 aaPredicted RBP21.88■■□□□ 1.09
RTCA-201ENST00000260563 SEPT11Q9NVA2 429 aaKnown RBP21.88■■□□□ 1.09
RTCA-201ENST00000260563 CLEC1BQ9P126 229 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.88■■□□□ 1.09
RTCA-201ENST00000260563 OBSL1O75147 1896 aa21.88■■□□□ 1.09
RTCA-201ENST00000260563 DDX3XO00571 662 aaKnown RBP eCLIP21.87■■□□□ 1.096e-36■■■■□ 26.5
RTCA-201ENST00000260563 IPO7O95373 1038 aaKnown RBP21.87■■□□□ 1.09
RTCA-201ENST00000260563 LCA5LO95447 670 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 NPR3P17342 541 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 ATF6P18850 670 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 LTBRP36941 435 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 GPR15P49685 360 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 CACNA2D1P54289 1103 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 BCAT1P54687 386 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 FMO1Q01740 532 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 DLX2Q07687 328 aaPredicted RBP21.87■■□□□ 1.09
RTCA-201ENST00000260563 SPA17Q15506 151 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 LCLAT1Q6UWP7 414 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 ELMOD1Q8N336 334 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 ACRBPQ8NEB7 543 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 CMASQ8NFW8 434 aaPredicted RBP21.87■■□□□ 1.09
RTCA-201ENST00000260563 SLC30A5Q8TAD4 765 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 ZNF606Q8WXB4 792 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 ZSWIM1Q9BR11 485 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 UBE2ZQ9H832 354 aaPredicted RBP21.87■■□□□ 1.09
RTCA-201ENST00000260563 XIRP2A4UGR9 3374 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 DENND4AQ7Z401 1863 aa21.87■■□□□ 1.09
RTCA-201ENST00000260563 CCDC195A0A1B0GUA6 201 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 F8VP50 259 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 M0QYV0 167 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 CCL16O15467 120 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 XYLBO75191 536 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 EPHB3P54753 998 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 SLC8A3P57103 927 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 VEPH1Q14D04 833 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 CNGA2Q16280 664 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 DDR2Q16832 855 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 RARS2Q5T160 578 aaKnown RBP21.86■■□□□ 1.09
RTCA-201ENST00000260563 CLEC20AQ6ZU45 233 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 ZSCAN30Q86W11 494 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 C12orf76Q8N812 135 aaPredicted RBP21.86■■□□□ 1.09
RTCA-201ENST00000260563 KIAA1524Q8TCG1 905 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 DUSP16Q9BY84 665 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 ADGRG1Q9Y653 693 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 DOCK6Q96HP0 2047 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 DENND4CQ5VZ89 1909 aa21.86■■□□□ 1.09
RTCA-201ENST00000260563 ZNF263O14978 683 aa21.85■■□□□ 1.09
RTCA-201ENST00000260563 MICAL2O94851 1124 aa21.85■■□□□ 1.09
RTCA-201ENST00000260563 CCDC175P0C221 793 aa21.85■■□□□ 1.09
RTCA-201ENST00000260563 MAP3K7CLP57077 242 aa21.85■■□□□ 1.09
RTCA-201ENST00000260563 KRT83P78385 493 aa21.85■■□□□ 1.09
RTCA-201ENST00000260563 BST2Q10589 180 aaKnown RBP21.85■■□□□ 1.09
RTCA-201ENST00000260563 SYCE2Q6PIF2 218 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms