RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SLC2A14Q8TDB8 520 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 ING5Q8WYH8 240 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 CYFIP2Q96F07 1278 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 SPATA17Q96L03 361 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 C8orf48Q96LL4 319 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 CEP295NLQ96MC4 621 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 HEXIM2Q96MH2 286 aaKnown RBP17.78■□□□□ 0.44
SDCBP-201ENST00000260130 XPO4Q9C0E2 1151 aaKnown RBP17.78■□□□□ 0.44
SDCBP-201ENST00000260130 FAM49BQ9NUQ9 324 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 SLC38A8A6NNN8 435 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 F8VP50 259 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 MOSPD3O75425 235 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 CEBPBP17676 345 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 SLC9A1P19634 815 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 CACNA2D1P54289 1103 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 RAD23BP54727 409 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 MTMR3Q13615 1198 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 UBR7Q8N806 425 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 SLC4A11Q8NBS3 891 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 STKLD1Q8NE28 680 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 SMARCD1Q96GM5 515 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 IFNKQ9P0W0 207 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.44
SDCBP-201ENST00000260130 MAGED2Q9UNF1 606 aaPredicted RBP17.77■□□□□ 0.44
SDCBP-201ENST00000260130 NCOR1O75376 2440 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 A0A1W2PRU2 124 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 PES1O00541 588 aaKnown RBP17.77■□□□□ 0.43
SDCBP-201ENST00000260130 GJA1P17302 382 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 GABRR2P28476 465 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 GAREM2Q75VX8 874 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 SHKBP1Q8TBC3 707 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 KAT5Q92993 513 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 MCRS1Q96EZ8 462 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 HNRNPABQ99729 332 aaKnown RBP17.77■□□□□ 0.43
SDCBP-201ENST00000260130 UBE2TQ9NPD8 197 aaPredicted RBP17.77■□□□□ 0.43
SDCBP-201ENST00000260130 TMEM30AQ9NV96 361 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 TAB2Q9NYJ8 693 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 GDE1Q9NZC3 331 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 OGFRQ9NZT2 677 aa17.77■□□□□ 0.43
SDCBP-201ENST00000260130 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 NRG2O14511 850 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-201ENST00000260130 NOL4O94818 638 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 TUBB4AP04350 444 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 PON1P27169 355 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 KRT31Q15323 416 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 MYRFLQ96LU7 910 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 KCNK16Q96T55 309 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 ATXN3LQ9H3M9 355 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 IL21Q9HBE4 155 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 TRMT1Q9NXH9 659 aaKnown RBP17.76■□□□□ 0.43
SDCBP-201ENST00000260130 NOTCH4Q99466 2003 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 AP1G2O75843 785 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 CDK11BP21127 795 aaKnown RBP17.76■□□□□ 0.43
SDCBP-201ENST00000260130 ACO1P21399 889 aaKnown RBP17.76■□□□□ 0.43
SDCBP-201ENST00000260130 ADORA2BP29275 332 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 ANKRD20A12PQ8NF67 263 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 JAKMIP2Q96AA8 810 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 TRMT2BQ96GJ1 504 aaKnown RBP17.76■□□□□ 0.43
SDCBP-201ENST00000260130 VPS16Q9H269 839 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 UXTQ9UBK9 157 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-201ENST00000260130 PCDHB4Q9Y5E5 795 aa17.76■□□□□ 0.43
SDCBP-201ENST00000260130 ZNF18P17022 549 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 CDC25CP30307 473 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 TEAD2Q15562 447 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 PPP1R26Q5T8A7 1209 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-201ENST00000260130 POTEHQ6S545 545 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 TMEM270Q6UE05 265 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 KHSRPQ92945 711 aaKnown RBP eCLIP17.75■□□□□ 0.435e-6■■■■□ 22.3
SDCBP-201ENST00000260130 FAM81BQ96LP2 452 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 KREMEN1Q96MU8 473 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 HSD3B7Q9H2F3 369 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 KCNK12Q9HB15 430 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 DMAP1Q9NPF5 467 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-201ENST00000260130 KRT82Q9NSB4 513 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 IGSF9Q9P2J2 1179 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 APEX2Q9UBZ4 518 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 MUTYHQ9UIF7 546 aa17.75■□□□□ 0.43
SDCBP-201ENST00000260130 F11P03951 625 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 ASGR2P07307 311 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 ENOSF1Q7L5Y1 443 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 NXPE3Q969Y0 559 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 GCNAQ96QF7 691 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 SMOQ99835 787 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 GPR88Q9GZN0 384 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 EHD2Q9NZN4 543 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 LIMA1Q9UHB6 759 aaKnown RBP17.74■□□□□ 0.43
SDCBP-201ENST00000260130 CCP110O43303 1012 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 CBFA2T2O43439 604 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 FAM200BP0CF97 657 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 MFAP3P55082 362 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 APBA1Q02410 837 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 TMEM150AQ86TG1 271 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 NUP93Q8N1F7 819 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 KIAA1257Q9ULG3 409 aa17.74■□□□□ 0.43
SDCBP-201ENST00000260130 LRRC10BA6NIK2 292 aa17.73■□□□□ 0.43
SDCBP-201ENST00000260130 ANHXE9PGG2 379 aa17.73■□□□□ 0.43
SDCBP-201ENST00000260130 BEST1O76090 585 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms