RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 UBXN4Q92575 508 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 HLA-CQ95604 372 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 DPEP3Q9H4B8 488 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 ANAPC7Q9UJX3 599 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.44■□□□□ 0.54
SRSF1-201ENST00000258962 CASTOR2A6NHX0 329 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 M0QYV0 167 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 CALB1P05937 261 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 COMTP21964 271 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 WARSP23381 471 aaKnown RBP18.43■□□□□ 0.54
SRSF1-201ENST00000258962 CA8P35219 290 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 PLPP4Q5VZY2 271 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 LCLAT1Q6UWP7 414 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 EP400NLQ6ZTU2 488 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 OSTM1Q86WC4 334 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 ERICH1Q86X53 443 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.43■□□□□ 0.54
SRSF1-201ENST00000258962 PDCL2Q8N4E4 241 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 NOA1Q8NC60 698 aaKnown RBP18.43■□□□□ 0.54
SRSF1-201ENST00000258962 APPL2Q8NEU8 664 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 CD101Q93033 1021 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 PAAF1Q9BRP4 392 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 IGFLR1Q9H665 355 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 TLE6Q9H808 572 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 THEGQ9P2T0 379 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 TJP2Q9UDY2 1190 aa18.43■□□□□ 0.54
SRSF1-201ENST00000258962 A8MXQ7 604 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 TADA2AO75478 443 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 GJB6O95452 261 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 CXCL14O95715 111 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 LMO2P25791 158 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 GPD2P43304 727 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 SMC1AQ14683 1233 aaKnown RBP18.42■□□□□ 0.54
SRSF1-201ENST00000258962 GOLGA7BQ2TAP0 167 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 PPP1R26Q5T8A7 1209 aaPredicted RBP18.42■□□□□ 0.54
SRSF1-201ENST00000258962 CYP4A22Q5TCH4 519 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 DPH6Q7L8W6 267 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 RBM23Q86U06 439 aaKnown RBP18.42■□□□□ 0.54
SRSF1-201ENST00000258962 ADGRF2Q8IZF7 708 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 BCL7CQ8WUZ0 217 aaPredicted RBP18.42■□□□□ 0.54
SRSF1-201ENST00000258962 ANKRD7Q92527 254 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 RABGGTAQ92696 567 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 PBKQ96KB5 322 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 CPXM1Q96SM3 734 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 LPIN3Q9BQK8 851 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 TSPAN16Q9UKR8 245 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 SCINQ9Y6U3 715 aa18.42■□□□□ 0.54
SRSF1-201ENST00000258962 COL6A3P12111 3177 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 CYB561D2O14569 222 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 FSCN2O14926 492 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 HUS1O60921 280 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 RPL9P32969 192 aaKnown RBP18.41■□□□□ 0.54
SRSF1-201ENST00000258962 NRIP1P48552 1158 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 STILQ15468 1287 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 UPP1Q16831 310 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 AAK1Q2M2I8 961 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 PKDCCQ504Y2 493 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 PPP1R15BQ5SWA1 713 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 DCAF12L1Q5VU92 463 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 CRYBG2Q8N1P7 616 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 UBA3Q8TBC4 463 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 KRT35Q92764 455 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 RPGRIP1Q96KN7 1286 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 SENP8Q96LD8 212 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 EPC1Q9H2F5 836 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 SNX25Q9H3E2 840 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 MRPL47Q9HD33 250 aaKnown RBP18.41■□□□□ 0.54
SRSF1-201ENST00000258962 FAM49BQ9NUQ9 324 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 PARVAQ9NVD7 372 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 RNF14Q9UBS8 474 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 PLXNA4Q9HCM2 1894 aa18.41■□□□□ 0.54
SRSF1-201ENST00000258962 PDGFRBP09619 1106 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 GNL1P36915 607 aaPredicted RBP18.4■□□□□ 0.54
SRSF1-201ENST00000258962 MARCKSL1P49006 195 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 AARSP49588 968 aaKnown RBP eCLIP18.4■□□□□ 0.54
SRSF1-201ENST00000258962 ITIH3Q06033 890 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 C2orf54Q08AI8 447 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 HYAL1Q12794 435 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 PDCLQ13371 301 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 CCDC181Q5TID7 509 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 WSCD1Q658N2 575 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 ARHGAP17Q68EM7 881 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 TTC30AQ86WT1 665 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 MRPL43Q8N983 215 aaKnown RBP18.4■□□□□ 0.54
SRSF1-201ENST00000258962 ALG3Q92685 438 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 UROC1Q96N76 676 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 CLDND1Q9NY35 253 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 ADAM28Q9UKQ2 775 aa18.4■□□□□ 0.54
SRSF1-201ENST00000258962 MIF4GDA9UHW6 222 aaKnown RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 GABRDO14764 452 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 ERBB2P04626 1255 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 FAM163BP0C2L3 166 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 CTSAP10619 480 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 CTNNA2P26232 953 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 PAFAH1B1P43034 410 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.54
SRSF1-201ENST00000258962 CFAP221Q4G0U5 840 aa18.39■□□□□ 0.54
SRSF1-201ENST00000258962 KIAA1841Q6NSI8 718 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms