RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 A8MU76 341 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 RIPK2O43353 540 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ALDH1A2O94788 518 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 SEMA3DO95025 777 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 CAPNS1P04632 268 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PCSK6P29122 969 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PHC1P78364 1004 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 CYP4F8P98187 520 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 AMPD2Q01433 879 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 MAP3K10Q02779 954 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 LGALS3BPQ08380 585 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 HERC3Q15034 1050 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PARP6Q2NL67 630 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ALKBH5Q6P6C2 394 aaKnown RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 EPM2AIP1Q7L775 607 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 KRT74Q7RTS7 529 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PIGWQ7Z7B1 504 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 MB21D2Q8IYB1 491 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ASZ1Q8WWH4 475 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 RUBCNQ92622 972 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 LTV1Q96GA3 475 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 TP63Q9H3D4 680 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 TRIM45Q9H8W5 580 aaPredicted RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 TIGARQ9NQ88 270 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 SACM1LQ9NTJ5 587 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 GIMAP4Q9NUV9 329 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 AXIN2Q9Y2T1 843 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 IPPQ9Y573 584 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 EFCAB6Q5THR3 1501 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ARHGEF35A5YM69 484 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 B4E1Z4 1266 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 H0Y626 953 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PHF2O75151 1096 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 CFBP00751 764 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 MT-ND3P03897 115 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PON1P27169 355 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 PMLP29590 882 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 HTR2BP41595 481 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 NPY2RP49146 381 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 HARS2P49590 506 aaKnown RBP8.06□□□□□ -1.12
GPNMB-201ENST00000258733 RAB14P61106 215 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 WASHC2DQ5SRD0 308 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 IFFO2Q5TF58 517 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF425Q6IV72 752 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 SCUBE3Q8IX30 993 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 SYCE1Q8N0S2 351 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ADSSL1Q8N142 457 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 CARFQ8N187 725 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 CAVIN3Q969G5 261 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 EYA1Q99502 592 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 OLFM1Q99784 485 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 ISCA1Q9BUE6 129 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 SAGE1Q9NXZ1 904 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 TXNDC16Q9P2K2 825 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 DTX4Q9Y2E6 619 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 RFX7Q2KHR2 1363 aa8.06□□□□□ -1.12
GPNMB-201ENST00000258733 TRAPPC8Q9Y2L5 1435 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 TEX51A0A1B0GUA7 166 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 WDR91A4D1P6 747 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 OR6C74A6NCV1 312 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 DCDC2CA8MYV0 355 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 POLR2DO15514 142 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 CCDC22O60826 627 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 IFIT1P09914 478 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 EEF2P13639 858 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 FGFR4P22455 802 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 NR4A1P22736 598 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 RFC1P35251 1148 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 CCR10P46092 362 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ERVK-21P61565 698 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 GTF2IRD2BQ6EKJ0 949 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 AAGABQ6PD74 315 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 LRRC74BQ6ZQY2 392 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 RFX8Q6ZV50 586 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 GTF2IRD2Q86UP8 949 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 BBS7Q8IWZ6 715 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 Q8N9G6 341 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ST13P5Q8NFI4 369 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 SGF29Q96ES7 293 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 RMND5BQ96G75 393 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 OSBPL6Q9BZF3 934 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 PAIP1Q9H074 479 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 OSGEPL1Q9H4B0 414 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 MCM9Q9NXL9 1143 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 STK17AQ9UEE5 414 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 AFF4Q9UHB7 1163 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 NUP50Q9UKX7 468 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 DMTF1Q9Y222 760 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 MRPS7Q9Y2R9 242 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ADGRB3O60242 1522 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ATP7AQ04656 1500 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 C16orf96A6NNT2 1141 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 SLC22A1O15245 554 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 GATCO43716 136 aaKnown RBP8.05□□□□□ -1.12
GPNMB-201ENST00000258733 EXOC3O60645 756 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 ATG13O75143 517 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 SLITRK3O94933 977 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 CCNDBP1O95273 360 aa8.05□□□□□ -1.12
GPNMB-201ENST00000258733 C7P10643 843 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms