RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SLC39A10Q9ULF5 831 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 FAM95CA0A1B0GW59 222 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 HEATR9A2RTY3 570 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 PDHXO00330 501 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 FBXW4P57775 412 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 MYL6P60660 151 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 MTA1Q13330 715 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 CTXN3Q4LDR2 81 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 FBXO47Q5MNV8 452 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 ZPBP2Q6X784 338 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 ADCK2Q7Z695 626 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 LRRC6Q86X45 466 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 PGBD3Q8N328 593 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 TGM2P21980 687 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 AXLP30530 894 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 MAP3K10Q02779 954 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 PAPD7Q5XG87 772 aaKnown RBP19.68■□□□□ 0.74
PTPRE-201ENST00000254667 NT5DC4Q86YG4 428 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 L3MBTL3Q96JM7 780 aaPredicted RBP19.68■□□□□ 0.74
PTPRE-201ENST00000254667 MTG1Q9BT17 334 aaPredicted RBP19.68■□□□□ 0.74
PTPRE-201ENST00000254667 NEUROG2Q9H2A3 272 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 ASB7Q9H672 318 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 TRPM5Q9NZQ8 1165 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 YY1P25490 414 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 APOBEC3HQ6NTF7 200 aaKnown RBP19.68■□□□□ 0.74
PTPRE-201ENST00000254667 ANKRD7Q92527 254 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 CPB2Q96IY4 423 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 OLFM3Q96PB7 478 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 GID8Q9NWU2 228 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 TRPC5OSA6NMA1 111 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 PPATQ06203 517 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 GRIK4Q16099 956 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 C11orf63Q6NUN7 778 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 OTOP1Q7RTM1 612 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 TAGAPQ8N103 731 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 SPATA17Q96L03 361 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 ZMYM2Q9UBW7 1377 aa19.68■□□□□ 0.74
PTPRE-201ENST00000254667 MAP2P11137 1827 aaKnown RBP19.68■□□□□ 0.74
PTPRE-201ENST00000254667 URODP06132 367 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 INSRRP14616 1297 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 LSP1P33241 339 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 ALDH5A1P51649 535 aaPredicted RBP19.67■□□□□ 0.74
PTPRE-201ENST00000254667 SFSWAPQ12872 951 aaKnown RBP19.67■□□□□ 0.74
PTPRE-201ENST00000254667 TAF2Q6P1X5 1199 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 CDK5RAP1Q96SZ6 601 aaKnown RBP19.67■□□□□ 0.74
PTPRE-201ENST00000254667 CCDC90BQ9GZT6 254 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 RRN3Q9NYV6 651 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 CPA4Q9UI42 421 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 AURKCQ9UQB9 309 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 SDR42E2A6NKP2 422 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 TRIM49D1C9J1S8 452 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 H2AFYO75367 372 aaKnown RBP19.67■□□□□ 0.74
PTPRE-201ENST00000254667 UCMAQ8WVF2 138 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 STARD7Q9NQZ5 370 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 FRMPD4Q14CM0 1322 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 PMPCBO75439 489 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 RRM1P23921 792 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 HSD17B3P37058 310 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 MED21Q13503 144 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 AGAP9Q5VTM2 703 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 WDR93Q6P2C0 686 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 ABRAQ8N0Z2 381 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 UBE2OQ9C0C9 1292 aaKnown RBP19.67■□□□□ 0.74
PTPRE-201ENST00000254667 ABHD16BQ9H3Z7 469 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 L2HGDHQ9H9P8 463 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 PHF20L1A8MW92 1017 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 NCAM2O15394 837 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 TIMM44O43615 452 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 GLRA3O75311 464 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 CYP3A4P08684 503 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 REPS2Q8NFH8 660 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 CCDC126Q96EE4 140 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 TSC22D3Q99576 134 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 KLC4Q9NSK0 619 aa19.67■□□□□ 0.74
PTPRE-201ENST00000254667 MARCOQ9UEW3 520 aaPredicted RBP19.67■□□□□ 0.74
PTPRE-201ENST00000254667 ZDHHC17Q8IUH5 632 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 SOCS4Q8WXH5 440 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 AP4E1Q9UPM8 1137 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 RPS6KL1Q9Y6S9 549 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 C2CD2LO14523 706 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 SLITRK3O94933 977 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 ZNF410Q86VK4 478 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 VPS37AQ8NEZ2 397 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 KCNV2Q8TDN2 545 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 ACSF2Q96CM8 615 aaPredicted RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 SEC16BQ96JE7 1060 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 LRRC40Q9H9A6 602 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 TRMT6Q9UJA5 497 aaKnown RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 USP18Q9UMW8 372 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 CLCA2Q9UQC9 943 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 DRG1Q9Y295 367 aaKnown RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 FAM32AQ9Y421 112 aaKnown RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 ZBTB17Q13105 803 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 MROH9Q5TGP6 573 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 SPOCD1Q6ZMY3 1216 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 PPP1R36Q96LQ0 422 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 POP1Q99575 1024 aaKnown RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 TMEM51Q9NW97 253 aa19.66■□□□□ 0.74
PTPRE-201ENST00000254667 BARX2Q9UMQ3 279 aaPredicted RBP19.66■□□□□ 0.74
PTPRE-201ENST00000254667 MBL2P11226 248 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms