RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TMEM109Q9BVC6 243 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 ROPN1BQ9BZX4 212 aaPredicted RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 ASB7Q9H672 318 aa16.54■□□□□ 0.24
LRFN1-201ENST00000248668 ROPN1Q9HAT0 212 aaPredicted RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 TPX2Q9ULW0 747 aaKnown RBP16.54■□□□□ 0.24
LRFN1-201ENST00000248668 EXOC1LA0A1B0GW35 172 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 SPAG7O75391 227 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 PDGFRAP16234 1089 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 PDIA2Q13087 525 aaKnown RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 VSTM1Q6UX27 236 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 ZCCHC9Q8N567 271 aaKnown RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 RXFP2Q8WXD0 754 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 MAML3Q96JK9 1138 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 L3MBTL3Q96JM7 780 aaPredicted RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 SERPINB12Q96P63 405 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 ZNF317Q96PQ6 595 aaPredicted RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 B3GNT5Q9BYG0 378 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 NGRNQ9NPE2 291 aaKnown RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 BARX2Q9UMQ3 279 aaPredicted RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 SCN1AP35498 2009 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 P4HA1P13674 534 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 SARNPP82979 210 aaKnown RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 RBP5P82980 135 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 LMNB2Q03252 620 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 ACVR2BQ13705 512 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 MFSD5Q6N075 450 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 UNC45BQ8IWX7 931 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 RSAD2Q8WXG1 361 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 NFKBIZQ9BYH8 718 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 NXF3Q9H4D5 531 aaKnown RBP16.53■□□□□ 0.24
LRFN1-201ENST00000248668 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
LRFN1-201ENST00000248668 A0A1B0GUA9 196 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 KRT7P08729 469 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 PDGFRBP09619 1106 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 CDH6P55285 790 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 GPR162Q16538 588 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 FAM187BQ17R55 369 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 NIPA2Q8N8Q9 360 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 BBOF1Q8ND07 529 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 TCRBV7S3A2A0A539 114 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 CTCFP49711 727 aaPredicted RBP16.52■□□□□ 0.24
LRFN1-201ENST00000248668 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
LRFN1-201ENST00000248668 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.24
LRFN1-201ENST00000248668 C1orf228Q6PIY5 440 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 NT5C1AQ9BXI3 368 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
LRFN1-201ENST00000248668 GLTPD2A6NH11 291 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 TCP11X1B4DZS4 312 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 PMF1Q6P1K2 205 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 TINF2Q9BSI4 451 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 OSBPL7Q9BZF2 842 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 TRIM6Q9C030 488 aaPredicted RBP16.52■□□□□ 0.23
LRFN1-201ENST00000248668 DPEP3Q9H4B8 488 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 FGFR1OP2Q9NVK5 253 aa16.52■□□□□ 0.23
LRFN1-201ENST00000248668 RASA4BC9J798 803 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 RASA4O43374 803 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 VDRP11473 427 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 BASP1P80723 227 aaKnown RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 DGKDQ16760 1214 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 TNFAIP8L3Q5GJ75 292 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 CROCCP2Q86T23 111 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 PTPN18Q99952 460 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 HOXA11P31270 313 aaPredicted RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 GCLCP48506 637 aaPredicted RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 EIF3EP60228 445 aaKnown RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 COPS2P61201 443 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 ZNF268Q14587 947 aaPredicted RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 EFTUD2Q15029 972 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 SLC35B2Q8TB61 432 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 THOC1Q96FV9 657 aaKnown RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 NME7Q9Y5B8 376 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 MSS51Q4VC12 460 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 RNASEH2BQ5TBB1 312 aaKnown RBP16.51■□□□□ 0.23
LRFN1-201ENST00000248668 C6orf89Q6UWU4 347 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 CEP57Q86XR8 500 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 GJD2Q9UKL4 321 aa16.51■□□□□ 0.23
LRFN1-201ENST00000248668 TRUB2O95900 331 aaKnown RBP16.5■□□□□ 0.23
LRFN1-201ENST00000248668 RBP3P10745 1247 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 ADORA2BP29275 332 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 SSTR1P30872 391 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 ATICP31939 592 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 ELF1P32519 619 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 ZC3H12AQ5D1E8 599 aaKnown RBP16.5■□□□□ 0.23
LRFN1-201ENST00000248668 TTC30AQ86WT1 665 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 C4orf33Q8N1A6 199 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CCDC77Q9BR77 488 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 MAGEB5Q9BZ81 275 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 ITGA11Q9UKX5 1188 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 HEY1Q9Y5J3 304 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CITO14578 2027 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 SKAP2O75563 359 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms