RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 THP07101 528 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 PSEN2P49810 448 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 TMED1Q13445 227 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 ADGRF2Q8IZF7 708 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 GIPC2Q8TF65 315 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 TLR10Q9BXR5 811 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 CELF4Q9BZC1 486 aaKnown RBP16.43■□□□□ 0.22
SIN3B-201ENST00000248054 PABPC3Q9H361 631 aaKnown RBP16.43■□□□□ 0.22
SIN3B-201ENST00000248054 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 BST2Q10589 180 aaKnown RBP16.43■□□□□ 0.22
SIN3B-201ENST00000248054 TBCBQ99426 244 aa16.43■□□□□ 0.22
SIN3B-201ENST00000248054 TGFB1I1O43294 461 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 ATP9AO75110 1047 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 PDE1CQ14123 709 aaPredicted RBP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 TTMPQ5BVD1 217 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 ABHD15Q6UXT9 468 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 SPATA21Q7Z572 469 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 ZNF513Q8N8E2 541 aaPredicted RBP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 XAB2Q9HCS7 855 aaKnown RBP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 NSMCE4AQ9NXX6 385 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 TTC36A6NLP5 189 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 BFSP2Q13515 415 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 WDR59Q6PJI9 974 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 TRPM8Q7Z2W7 1104 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 SERPINB12Q96P63 405 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 COL18A1P39060 1754 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 MOCS2O96007 188 aaPredicted RBP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 FDFT1P37268 417 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 KLC1Q07866 573 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 RASSF3Q86WH2 238 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 IRF2BP1Q8IU81 584 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 NCANO14594 1321 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 MROH7Q68CQ1 1323 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 PIK3R2O00459 728 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 CYB561D2O14569 222 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 TOMM70O94826 608 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 MYBL2P10244 700 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 UGP2Q16851 508 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 THEMIS2Q5TEJ8 643 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 FAM47EQ6ZV65 393 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 ACOT1Q86TX2 421 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 FAM71AQ8IYT1 594 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 ATPAF2Q8N5M1 289 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 AENQ8WTP8 325 aaKnown RBP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 DTNBP1Q96EV8 351 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 XPO6Q96QU8 1125 aaKnown RBP16.42■□□□□ 0.22
SIN3B-201ENST00000248054 TRABDQ9H4I3 376 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 RRN3Q9NYV6 651 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 FAM8A1Q9UBU6 413 aa16.42■□□□□ 0.22
SIN3B-201ENST00000248054 NUP98P52948 1817 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 NT5DC3Q86UY8 548 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 AGGF1Q8N302 714 aaeCLIP16.41■□□□□ 0.22
SIN3B-201ENST00000248054 B4GALNT2Q8NHY0 566 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 SLC7A14Q8TBB6 771 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 PIP4K2CQ8TBX8 421 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 HDAC7Q8WUI4 952 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 OSMRQ99650 979 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 WWP1Q9H0M0 922 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 MRGBPQ9NV56 204 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 ZC3H7BQ9UGR2 993 aaKnown RBP16.41■□□□□ 0.22
SIN3B-201ENST00000248054 ZNF541Q9H0D2 1346 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 IGF2BP3O00425 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
SIN3B-201ENST00000248054 ANO5Q75V66 913 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 TTC8Q8TAM2 541 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 GNGT2O14610 69 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 OPLAHO14841 1288 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 HMGCRP04035 888 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 APRTP07741 180 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 RARGP13631 454 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 PAX3P23760 479 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 GRAMD1BQ3KR37 738 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 CATSPER1Q8NEC5 780 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 ATP6V1E2Q96A05 226 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 H7C4K7 107 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 GRAP2O75791 330 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 MRPS35P82673 323 aaKnown RBP16.41■□□□□ 0.22
SIN3B-201ENST00000248054 ZNF235Q14590 738 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
SIN3B-201ENST00000248054 SPOCD1Q6ZMY3 1216 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 TMEM139Q8IV31 216 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 SHC3Q92529 594 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 RAPGEF5Q92565 580 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
SIN3B-201ENST00000248054 PCDHB7Q9Y5E2 793 aa16.41■□□□□ 0.22
SIN3B-201ENST00000248054 KCNJ1P48048 391 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 NOP9Q86U38 636 aaKnown RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 CCNJLQ8IV13 435 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 PPHLN1Q8NEY8 458 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms