RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ZNF200P98182 395 aaPredicted RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 EMC2Q15006 297 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 IZUMO2Q6UXV1 221 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 POLNQ7Z5Q5 900 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 PPIL6Q8IXY8 311 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 ZNF526Q8TF50 670 aaPredicted RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SLC17A6Q9P2U8 582 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 ATRNL1Q5VV63 1379 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 C2CD2LO14523 706 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 CIB2O75838 187 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 ZWINTO95229 277 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 SKIV2L2P42285 1042 aaKnown RBP17.63■□□□□ 0.41
SGPP1-201ENST00000247225 ACTR2P61160 394 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 ZRSR2Q15696 482 aaKnown RBP17.63■□□□□ 0.41
SGPP1-201ENST00000247225 PPP1R15BQ5SWA1 713 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 ENOSF1Q7L5Y1 443 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 CCDC110Q8TBZ0 833 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 INPP5DQ92835 1189 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 PXMP2Q9NR77 195 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 hCG_2014768A0A024R1R8 64 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 KCNN4O15554 427 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 CDCA2Q69YH5 1023 aaPredicted RBP17.63■□□□□ 0.41
SGPP1-201ENST00000247225 PLEKHA7Q6IQ23 1121 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 NUDCD3Q8IVD9 361 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 RIBC1Q8N443 379 aaPredicted RBP17.63■□□□□ 0.41
SGPP1-201ENST00000247225 SLC26A7Q8TE54 656 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 JPH1Q9HDC5 661 aaPredicted RBP17.63■□□□□ 0.41
SGPP1-201ENST00000247225 LRRC42Q9Y546 428 aa17.63■□□□□ 0.41
SGPP1-201ENST00000247225 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 TCRBV9S1A1TA0A576 114 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 PRPF4O43172 522 aaKnown RBP eCLIP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 ASNSP08243 561 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 ACO1P21399 889 aaKnown RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 CDKN2BP42772 138 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 SLC25A3Q00325 362 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 RBBP5Q15291 538 aaKnown RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 OXNAD1Q96HP4 312 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 FGD4Q96M96 766 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 ACTL7BQ9Y614 415 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 TCEA3O75764 348 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 APBA3O96018 575 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 CHRM1P11229 460 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 NCF2P19878 526 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 HSPA1LP34931 641 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 SERPINB6P35237 376 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 MRPS35P82673 323 aaKnown RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 C15orf59Q2T9L4 293 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 C6orf163Q5TEZ5 329 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 RGS9BPQ6ZS82 235 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 HACE1Q8IYU2 909 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 NLRP4Q96MN2 994 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 SRPK1Q96SB4 655 aaKnown RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 CEP41Q9BYV8 373 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 GINS2Q9Y248 185 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 CXorf49A8MYA2 514 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 LYPLA1O75608 230 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 SORBS2O94875 1100 aaKnown RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 MMP8P22894 467 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 HADHQ16836 314 aaKnown RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 WASHC2DQ5SRD0 308 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 FAM151AQ8WW52 585 aa17.62■□□□□ 0.41
SGPP1-201ENST00000247225 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
SGPP1-201ENST00000247225 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 DGAT1O75907 488 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 RNF8O76064 485 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 PSAPP07602 524 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 SLC34A1Q06495 639 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 BST1Q10588 318 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 KRT81Q14533 505 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 WDR78Q5VTH9 848 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 UNC5BQ8IZJ1 945 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 NDUFAF2Q8N183 169 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 SH3GL3Q99963 347 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.61■□□□□ 0.41
SGPP1-201ENST00000247225 SENP1Q9P0U3 644 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 INO80B-WBP1J3KQ70 363 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 RGL2O15211 777 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 HSD17B4P51659 736 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 IGBP1P78318 339 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 CCDC15Q0P6D6 951 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 KLHL38Q2WGJ6 581 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 ZNF699Q32M78 642 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 FAM102AQ5T9C2 384 aaPredicted RBP17.61■□□□□ 0.41
SGPP1-201ENST00000247225 OR6B2Q6IFH4 312 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 TREML1Q86YW5 311 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 KIAA0319LQ8IZA0 1049 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 RBM15BQ8NDT2 890 aaKnown RBP17.61■□□□□ 0.41
SGPP1-201ENST00000247225 ZNF333Q96JL9 665 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 EBF4Q9BQW3 602 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 INO80BQ9C086 356 aaPredicted RBP17.61■□□□□ 0.41
SGPP1-201ENST00000247225 PCDH9Q9HC56 1237 aa17.61■□□□□ 0.41
SGPP1-201ENST00000247225 EDN1P05305 212 aa17.6■□□□□ 0.41
SGPP1-201ENST00000247225 MSX2P35548 267 aaPredicted RBP17.6■□□□□ 0.41
SGPP1-201ENST00000247225 FSTL1Q12841 308 aa17.6■□□□□ 0.41
SGPP1-201ENST00000247225 MCPH1Q8NEM0 835 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms