RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 F8VP50 259 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 TULP2O00295 520 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 SYN3O14994 580 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 PAPSS1O43252 624 aaPredicted RBP14.92□□□□□ -0.02
SDF2-201ENST00000247020 ATP2C2O75185 946 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 RNF8O76064 485 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 ZRANB2O95218 330 aaKnown RBP eCLIP14.92□□□□□ -0.02
SDF2-201ENST00000247020 ACAT1P24752 427 aaKnown RBP14.92□□□□□ -0.02
SDF2-201ENST00000247020 RGS7P49802 495 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 RNASE9P60153 205 aaKnown RBP14.92□□□□□ -0.02
SDF2-201ENST00000247020 TSPY1Q01534 308 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 ZNF211Q13398 564 aaPredicted RBP14.92□□□□□ -0.02
SDF2-201ENST00000247020 CYP1B1Q16678 543 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 EFHC1Q5JVL4 640 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 KIAA0319Q5VV43 1072 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 OVOS1Q6IE37 1185 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 CLEC20AQ6ZU45 233 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 PAQR9Q6ZVX9 377 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 MAATS1Q7Z4T9 603 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 FAM35AQ86V20 835 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 ZNF280BQ86YH2 543 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 RCOR2Q8IZ40 523 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 C12orf50Q8NA57 414 aaPredicted RBP14.92□□□□□ -0.02
SDF2-201ENST00000247020 CCDC26Q8TAB7 109 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 SMARCD1Q96GM5 515 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 SCLYQ96I15 445 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 PNKPQ96T60 521 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 KRT12Q99456 494 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 LRRC1Q9BTT6 524 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 B3GNT5Q9BYG0 378 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 PPP1R12CQ9BZL4 782 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 USTQ9Y2C2 406 aa14.92□□□□□ -0.02
SDF2-201ENST00000247020 PHF2O75151 1096 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 LRCH4O75427 683 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 FBXO21O94952 628 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 GLI1P08151 1106 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 CHRNA3P32297 505 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 PTPN9P43378 593 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 CLCN6P51797 869 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 CCL23P55773 120 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 ELAVL2Q12926 359 aaKnown RBP14.91□□□□□ -0.02
SDF2-201ENST00000247020 IKBKEQ14164 716 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 MAP9Q49MG5 647 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 DIS3LQ8TF46 1054 aaKnown RBP14.91□□□□□ -0.02
SDF2-201ENST00000247020 PCED1BQ96HM7 432 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 PKMYT1Q99640 499 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 LPIN3Q9BQK8 851 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 RTP3Q9BQQ7 232 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 MED10Q9BTT4 135 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 EPC1Q9H2F5 836 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 CSNK1G1Q9HCP0 422 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 PNPLA8Q9NP80 782 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 HOMER3Q9NSC5 361 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 TMEM39AQ9NV64 488 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 ATP11BQ9Y2G3 1177 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 TIMM13Q9Y5L4 95 aaPredicted RBP14.91□□□□□ -0.02
SDF2-201ENST00000247020 VWA8A3KMH1 1905 aa14.91□□□□□ -0.02
SDF2-201ENST00000247020 SART1O43290 800 aaKnown RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 OAZ2O95190 189 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 PDGFRAP16234 1089 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 CYP2C18P33260 490 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 OR1G1P47890 313 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 SLC25A11Q02978 314 aaKnown RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 YWHAHQ04917 246 aaPredicted RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 DHX34Q14147 1143 aaKnown RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 TMCO3Q6UWJ1 677 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 PIGZQ86VD9 579 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 LRRC43Q8N309 656 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 EIF1ADQ8N9N8 165 aaKnown RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 COLEC11Q9BWP8 271 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 AP1M1Q9BXS5 423 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 KRT82Q9NSB4 513 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 ADAM28Q9UKQ2 775 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 EFR3BQ9Y2G0 817 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 MYBPHLA2RUH7 354 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 CARNS1A5YM72 827 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 ATP8B1O43520 1251 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 B4GALT3O60512 393 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 EFCAB14O75071 495 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 GABBR2O75899 941 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 ITGB1P05556 798 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 SDC4P31431 198 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 SSR1P43307 286 aaKnown RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 FNTAP49354 379 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 LBX1P52954 281 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 VSNL1P62760 191 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 TCTN1Q2MV58 587 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 PAN2Q504Q3 1202 aaKnown RBP14.9□□□□□ -0.02
SDF2-201ENST00000247020 RAB41Q5JT25 222 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 C4orf50Q6ZRC1 276 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 NECAB2Q7Z6G3 386 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 SCUBE3Q8IX30 993 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 SCML4Q8N228 414 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 EMC1Q8N766 993 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 RXFP2Q8WXD0 754 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.9□□□□□ -0.02
SDF2-201ENST00000247020 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
SDF2-201ENST00000247020 TMEM106CQ9BVX2 250 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 OXCT2Q9BYC2 517 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms