RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CACNB2Q08289 660 aaPredicted RBP19.41■□□□□ 0.7
HOXC11-201ENST00000243082 IFFO1Q0D2I5 559 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 OASLQ15646 514 aaKnown RBP19.41■□□□□ 0.7
HOXC11-201ENST00000243082 KRT71Q3SY84 523 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 RAB6CQ53S08 254 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 AGBL2Q5U5Z8 902 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 GSTA5Q7RTV2 222 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 GLIS1Q8NBF1 620 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 STK32AQ8WU08 396 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 KHSRPQ92945 711 aaKnown RBP eCLIP19.41■□□□□ 0.7
HOXC11-201ENST00000243082 HAUS1Q96CS2 278 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 PEBP4Q96S96 227 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 RAB6CQ9H0N0 254 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 SPC25Q9HBM1 224 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 ANAPC5Q9UJX4 755 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 ST3GAL5Q9UNP4 418 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 RIPK2O43353 540 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 ADAMTS4O75173 837 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 GRAP2O75791 330 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CHRNA1P02708 482 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 RARBP10826 455 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 LRPAP1P30533 357 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 LILRA4P59901 499 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 SV2CQ496J9 727 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CYP4V2Q6ZWL3 525 aaPredicted RBP19.41■□□□□ 0.7
HOXC11-201ENST00000243082 SERINC5Q86VE9 423 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CCDC25Q86WR0 208 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 ALLCQ8N6M5 410 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 NKD2Q969F2 451 aaPredicted RBP19.41■□□□□ 0.7
HOXC11-201ENST00000243082 ZFP42Q96MM3 310 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 PPP1R10Q96QC0 940 aaKnown RBP19.41■□□□□ 0.7
HOXC11-201ENST00000243082 ZNF148Q9UQR1 794 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 MEIS3P2A8K0S8 358 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 PAPSS1O43252 624 aaPredicted RBP19.4■□□□□ 0.7
HOXC11-201ENST00000243082 RPS6KA5O75582 802 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 CCDC130P13994 396 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 ATP1A2P50993 1020 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 IRAK1P51617 712 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 VCPP55072 806 aaKnown RBP19.4■□□□□ 0.7
HOXC11-201ENST00000243082 SLC6A3Q01959 620 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 C15orf59Q2T9L4 293 aaPredicted RBP19.4■□□□□ 0.7
HOXC11-201ENST00000243082 BBS12Q6ZW61 710 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 RSPH3Q86UC2 560 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 SCUBE3Q8IX30 993 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 APPL2Q8NEU8 664 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 SLC35B2Q8TB61 432 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 HHIPL1Q96JK4 782 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 SENP6Q9GZR1 1112 aaPredicted RBP19.4■□□□□ 0.7
HOXC11-201ENST00000243082 SNX25Q9H3E2 840 aa19.4■□□□□ 0.7
HOXC11-201ENST00000243082 CCDC14Q49A88 953 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 LRRC31Q6UY01 552 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 ANKRD52Q8NB46 1076 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 KCTD6Q8NC69 237 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 BBOF1Q8ND07 529 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 PKNOX2Q96KN3 472 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 BCCIPQ9P287 314 aaKnown RBP eCLIP19.39■□□□□ 0.69
HOXC11-201ENST00000243082 SAE1Q9UBE0 346 aaPredicted RBP19.39■□□□□ 0.69
HOXC11-201ENST00000243082 DPYSL4O14531 572 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 CST8O60676 142 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 ITGAVP06756 1048 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 CTSHP09668 335 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 DYNLT1P63172 113 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 MGAT3Q09327 533 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 FAM47CQ5HY64 1035 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 IZUMO3Q5VZ72 239 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 LEKR1Q6ZMV7 388 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 TRMT10CQ7L0Y3 403 aaKnown RBP19.39■□□□□ 0.69
HOXC11-201ENST00000243082 GSTCDQ8NEC7 633 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 HSPH1Q92598 858 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 CFAP57Q96MR6 1250 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 B3GNT5Q9BYG0 378 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 CDC42EP4Q9H3Q1 356 aaKnown RBP19.39■□□□□ 0.69
HOXC11-201ENST00000243082 FAM105AQ9NUU6 356 aa19.39■□□□□ 0.69
HOXC11-201ENST00000243082 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 HUS1O60921 280 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 ENDOD1O94919 500 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 ZSCAN5DPP0CG00 497 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 IGFBP6P24592 240 aaPredicted RBP19.38■□□□□ 0.69
HOXC11-201ENST00000243082 ADORA2BP29275 332 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 RPL34P49207 117 aaKnown RBP19.38■□□□□ 0.69
HOXC11-201ENST00000243082 BST2Q10589 180 aaKnown RBP19.38■□□□□ 0.69
HOXC11-201ENST00000243082 HIBCHQ6NVY1 386 aaPredicted RBP19.38■□□□□ 0.69
HOXC11-201ENST00000243082 RPAINQ86UA6 219 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 OSTM1Q86WC4 334 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 ADGRF2Q8IZF7 708 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 ACTL9Q8TC94 416 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 PWWP2AQ96N64 755 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 TSPYL1Q9H0U9 437 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 ADAM7Q9H2U9 754 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 XPNPEP3Q9NQH7 507 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 CHST12Q9NRB3 414 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 NOVA2Q9UNW9 492 aaKnown RBP19.38■□□□□ 0.69
HOXC11-201ENST00000243082 GRIN2DO15399 1336 aa19.38■□□□□ 0.69
HOXC11-201ENST00000243082 CAND2O75155 1236 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 ALDH1A1P00352 501 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 ASGR1P07306 291 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 ETS1P14921 441 aa19.37■□□□□ 0.69
HOXC11-201ENST00000243082 WARSP23381 471 aaKnown RBP19.37■□□□□ 0.69
HOXC11-201ENST00000243082 CCND3P30281 292 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms