RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 TC2NQ8N9U0 490 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 IPMKQ8NFU5 416 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ACTRT1Q8TDG2 376 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 USP33Q8TEY7 942 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 WDR24Q96S15 920 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CCT8L2Q96SF2 557 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 LATS2Q9NRM7 1088 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 STMN3Q9NZ72 180 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ZNF229Q9UJW7 825 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 PRR23D1E9PI22 279 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 RNASEH1O60930 286 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 C6orf222P0C671 652 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 PRR23D2P0DMB1 279 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 GZMAP12544 262 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 RRM2P31350 389 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CAPZA2P47755 286 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 OAZ1P54368 228 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ANTXR2P58335 489 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 FKBP1AP62942 108 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 KDSRQ06136 332 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 C3orf62Q6ZUJ4 267 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 PLEKHH3Q7Z736 793 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ZNF557Q8N988 423 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 PCSK9Q8NBP7 692 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 ILKAPQ9H0C8 392 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 WDCPQ9H6R7 721 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 RBM12Q9NTZ6 932 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 AP3M1Q9Y2T2 418 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CEMIPQ8WUJ3 1361 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ERCC6L2Q5T890 1561 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CEP170BQ9Y4F5 1589 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 NCAM1P13591 858 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 SOAT1P35610 550 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 VHLP40337 213 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 MRPS35P82673 323 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 PPIL2Q13356 520 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CHI3L2Q15782 390 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 PLEKHM3Q6ZWE6 761 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ZNF438Q7Z4V0 828 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ADCK2Q7Z695 626 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 LUZP2Q86TE4 346 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CYGBQ8WWM9 190 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 KCNB2Q92953 911 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 EPS8L2Q9H6S3 715 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 LRRC40Q9H9A6 602 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 MLXIPLQ9NP71 852 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 PDGFCQ9NRA1 345 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 STK39Q9UEW8 545 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 SLC24A2Q9UI40 661 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ZDHHC9Q9Y397 364 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CASZ1Q86V15 1759 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 CCT8L1PA6NM43 557 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 USP1O94782 785 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 SLC9A1P19634 815 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 PAX3P23760 479 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 DNAJB2P25686 324 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 KRT20P35900 424 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 MYL6P60660 151 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 DSG1Q02413 1049 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 KLC1Q07866 573 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 GJC2Q5T442 439 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 CENPLQ8N0S6 344 aaPredicted RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 SLC25A41Q8N5S1 370 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 STARD8Q92502 1023 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 JADE3Q92613 823 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ATXN7L3BQ96GX2 97 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
CPS1-201ENST00000233072 YIPF3Q9GZM5 350 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 SYTL2Q9HCH5 934 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 GGA3Q9NZ52 723 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 KANSL3Q9P2N6 904 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 ENOPH1Q9UHY7 261 aa7.48□□□□□ -1.21
CPS1-201ENST00000233072 TMEM120BA0PK00 339 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 SDR42E2A6NKP2 422 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 STX7O15400 261 aaKnown RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 CST8O60676 142 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 FKBP9O95302 570 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 ENO3P13929 434 aaPredicted RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 ALOX15P16050 662 aaPredicted RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 SOX6P35712 828 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 OR1G1P47890 313 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 CTCFP49711 727 aaPredicted RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 MRPS25P82663 173 aaKnown RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 AMPD2Q01433 879 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 CACNB2Q08289 660 aaPredicted RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 CYLC2Q14093 348 aaPredicted RBP7.47□□□□□ -1.21
CPS1-201ENST00000233072 TFDP3Q5H9I0 405 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 FKBP9P1Q75LS8 142 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 TRIM48Q8IWZ4 208 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 DPF2Q92785 391 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 THAP11Q96EK4 314 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 ARMC7Q9H6L4 198 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 SOX13Q9UN79 622 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 DTNAQ9Y4J8 743 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 MSH4O15457 936 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 CYTH3O43739 400 aa7.47□□□□□ -1.21
CPS1-201ENST00000233072 ITGB3P05106 788 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms