RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 CHRNA3P32297 505 aa25■■□□□ 1.59
RRP9-201ENST00000232888 BRCC3P46736 316 aa25■■□□□ 1.59
RRP9-201ENST00000232888 CYP1B1Q16678 543 aa25■■□□□ 1.59
RRP9-201ENST00000232888 KIAA0319Q5VV43 1072 aa25■■□□□ 1.59
RRP9-201ENST00000232888 PAQR9Q6ZVX9 377 aa25■■□□□ 1.59
RRP9-201ENST00000232888 SLC26A9Q7LBE3 791 aa25■■□□□ 1.59
RRP9-201ENST00000232888 ZNF280BQ86YH2 543 aa25■■□□□ 1.59
RRP9-201ENST00000232888 IFT20Q8IY31 132 aa25■■□□□ 1.59
RRP9-201ENST00000232888 MED10Q9BTT4 135 aa25■■□□□ 1.59
RRP9-201ENST00000232888 MRPL9Q9BYD2 267 aaKnown RBP25■■□□□ 1.59
RRP9-201ENST00000232888 B3GNT5Q9BYG0 378 aa25■■□□□ 1.59
RRP9-201ENST00000232888 TBX21Q9UL17 535 aa25■■□□□ 1.59
RRP9-201ENST00000232888 TIMM13Q9Y5L4 95 aaPredicted RBP25■■□□□ 1.59
RRP9-201ENST00000232888 ATP8B1O43520 1251 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 PHF2O75151 1096 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 PTPN7P35236 360 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 EFHC1Q5JVL4 640 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 OVOS1Q6IE37 1185 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 AADACL2Q6P093 401 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 FAM171BQ6P995 826 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 CCNI2Q6ZMN8 369 aaPredicted RBP24.99■■□□□ 1.59
RRP9-201ENST00000232888 NPAS4Q8IUM7 802 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 CRIPAKQ8N1N5 446 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 EIF1ADQ8N9N8 165 aaKnown RBP24.99■■□□□ 1.59
RRP9-201ENST00000232888 C12orf50Q8NA57 414 aaPredicted RBP24.99■■□□□ 1.59
RRP9-201ENST00000232888 CASD1Q96PB1 797 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 HOMER3Q9NSC5 361 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 DMGDHQ9UI17 866 aaKnown RBP24.99■■□□□ 1.59
RRP9-201ENST00000232888 TANC1Q9C0D5 1861 aa24.99■■□□□ 1.59
RRP9-201ENST00000232888 GABBR2O75899 941 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 PDGFRAP16234 1089 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 DHX34Q14147 1143 aaKnown RBP24.98■■□□□ 1.59
RRP9-201ENST00000232888 INTS6LQ5JSJ4 861 aaKnown RBP24.98■■□□□ 1.59
RRP9-201ENST00000232888 PIGZQ86VD9 579 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 SCUBE3Q8IX30 993 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 EMC1Q8N766 993 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 HDAC7Q8WUI4 952 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 RXFP2Q8WXD0 754 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 RTP3Q9BQQ7 232 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 DDX47Q9H0S4 455 aaKnown RBP24.98■■□□□ 1.59
RRP9-201ENST00000232888 PCNTO95613 3336 aa24.98■■□□□ 1.59
RRP9-201ENST00000232888 RAD51CO43502 376 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 LRCH4O75427 683 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 ODF2Q5BJF6 829 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 FAM35AQ86V20 835 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 PRELID2Q8N945 189 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 PCED1BQ96HM7 432 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 SCLYQ96I15 445 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 GDF3Q9NR23 364 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 MYBPHLA2RUH7 354 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 FAM187AA6NFU0 413 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 FBXO21O94952 628 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 HEXIM1O94992 359 aaKnown RBP24.97■■□□□ 1.59
RRP9-201ENST00000232888 OR1G1P47890 313 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 CCL23P55773 120 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 TSPY1Q01534 308 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 SLC25A11Q02978 314 aaKnown RBP24.97■■□□□ 1.59
RRP9-201ENST00000232888 PAN2Q504Q3 1202 aaKnown RBP24.97■■□□□ 1.59
RRP9-201ENST00000232888 DAB2IPQ5VWQ8 1189 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 CLEC20AQ6ZU45 233 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 CCDC50Q8IVM0 306 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.97■■□□□ 1.59
RRP9-201ENST00000232888 KHSRPQ92945 711 aaKnown RBP eCLIP24.97■■□□□ 1.59
RRP9-201ENST00000232888 SMARCD1Q96GM5 515 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 TMEM175Q9BSA9 504 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 C11orf49Q9H6J7 331 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 KRT82Q9NSB4 513 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 PCYOX1Q9UHG3 505 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 EFR3BQ9Y2G0 817 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 NR2E1Q9Y466 385 aa24.97■■□□□ 1.59
RRP9-201ENST00000232888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.96■■□□□ 1.59
RRP9-201ENST00000232888 I3L4J1 428 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 SYN3O14994 580 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 GLI1P08151 1106 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 SDC4P31431 198 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 CYP2C18P33260 490 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 PTPN9P43378 593 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 FNTAP49354 379 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 SLC7A5Q01650 507 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 SMC1AQ14683 1233 aaKnown RBP24.96■■□□□ 1.59
RRP9-201ENST00000232888 CNKSR3Q6P9H4 555 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 ARFGAP1Q8N6T3 406 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 PKMYT1Q99640 499 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 COLEC11Q9BWP8 271 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 OSBPL8Q9BZF1 889 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 PPP1R12CQ9BZL4 782 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 LRRC19Q9H756 370 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 LRRC4Q9HBW1 653 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 TMEM39AQ9NV64 488 aa24.96■■□□□ 1.59
RRP9-201ENST00000232888 PIK3R2O00459 728 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 CLDN5O00501 218 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 B4GALT3O60512 393 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 AP1G2O75843 785 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 OAZ2O95190 189 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 KRT1P04264 644 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 ITGB1P05556 798 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 CLTBP09497 229 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 RARAP10276 462 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 LCP1P13796 627 aa24.95■■□□□ 1.58
RRP9-201ENST00000232888 FLT3P36888 993 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms