RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 OSMRQ99650 979 aa11.25□□□□□ -0.61
CDCA3-201ENST00000229265 NT5C1AQ9BXI3 368 aa11.25□□□□□ -0.61
CDCA3-201ENST00000229265 CELF4Q9BZC1 486 aaKnown RBP11.25□□□□□ -0.61
CDCA3-201ENST00000229265 ACP6Q9NPH0 428 aa11.25□□□□□ -0.61
CDCA3-201ENST00000229265 HPCAL4Q9UM19 191 aa11.25□□□□□ -0.61
CDCA3-201ENST00000229265 DRG1Q9Y295 367 aaKnown RBP11.25□□□□□ -0.61
CDCA3-201ENST00000229265 TRPV2Q9Y5S1 764 aa11.25□□□□□ -0.61
CDCA3-201ENST00000229265 PIRO00625 290 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 HSF2BPO75031 334 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 CAND2O75155 1236 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 KRT7P08729 469 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 SKIP12755 728 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 DESP17661 470 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 ITIH2P19823 946 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 IRS1P35568 1242 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 COILP38432 576 aaPredicted RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 HSPA9P38646 679 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 GPD2P43304 727 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 CARSP49589 748 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 OSTNP61366 133 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 SLC7A5Q01650 507 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 DLX2Q07687 328 aaPredicted RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 PAN2Q504Q3 1202 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 DCAF12L1Q5VU92 463 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 ADGRD2Q7Z7M1 963 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 VSIG1Q86XK7 387 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 DNAAF5Q86Y56 855 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 KLHL7Q8IXQ5 586 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 CEP120Q8N960 986 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 SLC4A11Q8NBS3 891 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 MAGOHBQ96A72 148 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 CPB2Q96IY4 423 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 SNX27Q96L92 541 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 SH3GL2Q99962 352 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 FOXP3Q9BZS1 431 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 TRIM6Q9C030 488 aaPredicted RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 MTIF3Q9H2K0 278 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 PRDM16Q9HAZ2 1276 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 TMEM51Q9NW97 253 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
CDCA3-201ENST00000229265 GINS2Q9Y248 185 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 BDP1A6H8Y1 2624 aa11.24□□□□□ -0.61
CDCA3-201ENST00000229265 GOLGA6BA6NDN3 693 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 GPR182O15218 404 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 LINC01565O15544 149 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ZNF623O75123 536 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 DGKIO75912 1065 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 TJP3O95049 919 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ERBB2P04626 1255 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 NFICP08651 508 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 FGFR1P11362 822 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 KRT3P12035 628 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 LRPAP1P30533 357 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 LTBRP36941 435 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 PBX3P40426 434 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
CDCA3-201ENST00000229265 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 TERF2Q15554 542 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ARHGAP17Q68EM7 881 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 DNAJC24Q6P3W2 148 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 DCUN1D2Q6PH85 259 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 CCDC137Q6PK04 289 aaKnown RBP11.23□□□□□ -0.61
CDCA3-201ENST00000229265 SND1Q7KZF4 910 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDCA3-201ENST00000229265 TMEM192Q8IY95 271 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 TTC13Q8NBP0 860 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 CASKIN2Q8WXE0 1202 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 IFT81Q8WYA0 676 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 KRT35Q92764 455 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ASB2Q96Q27 587 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
CDCA3-201ENST00000229265 GOLPH3Q9H4A6 298 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ASNSD1Q9NWL6 643 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 EHD2Q9NZN4 543 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
CDCA3-201ENST00000229265 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDCA3-201ENST00000229265 C9IYK1 514 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 NPTXRO95502 500 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 AMHP03971 560 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 CD58P19256 250 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 PCK1P35558 622 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 PTGIRP43119 386 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 ACADSBP45954 432 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 RPL34P49207 117 aaKnown RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 RNASE9P60153 205 aaKnown RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 SV2CQ496J9 727 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms