RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PCSK1NQ9UHG2 260 aa17.04■□□□□ 0.32
LTBR-201ENST00000228918 C2CD2LO14523 706 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TM9SF1O15321 606 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 MIPP30301 263 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TAF5Q15542 800 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 EEF1DP3Q658K8 133 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 NLRP9Q7RTR0 991 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 PALM2Q8IXS6 379 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 FAM71DQ8N9W8 422 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 KCTD6Q8NC69 237 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 ZNF398Q8TD17 642 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TCP10LQ8TDR4 215 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 ALKBH8Q96BT7 664 aaKnown RBP17.03■□□□□ 0.32
LTBR-201ENST00000228918 SDCBP2Q9H190 292 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 SYNCQ9H7C4 482 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 BTBD7Q9P203 1132 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 SIX4Q9UIU6 781 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 ACKR2O00590 384 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 MCF2LO15068 1137 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 DIAPH2O60879 1101 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 NEBLO76041 1014 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 KRT19P08727 400 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TGFB3P10600 412 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 CDH8P55286 799 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 SLC8A3P57103 927 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
LTBR-201ENST00000228918 ORC1Q13415 861 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 MTM1Q13496 603 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 LY6KQ17RY6 165 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 SLC45A4Q5BKX6 768 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 RIOX2Q8IUF8 465 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 MAB21L3Q8N8X9 362 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TWNKQ96RR1 684 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 TRIM6Q9C030 488 aaPredicted RBP17.03■□□□□ 0.32
LTBR-201ENST00000228918 NPHS2Q9NP85 383 aa17.03■□□□□ 0.32
LTBR-201ENST00000228918 B4GALT5O43286 388 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 TRUB2O95900 331 aaKnown RBP17.02■□□□□ 0.32
LTBR-201ENST00000228918 CXCL8P10145 99 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 RBP3P10745 1247 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 ATP2A2P16615 1042 aaKnown RBP17.02■□□□□ 0.32
LTBR-201ENST00000228918 BASP1P80723 227 aaKnown RBP17.02■□□□□ 0.32
LTBR-201ENST00000228918 SEPT7Q16181 437 aaKnown RBP17.02■□□□□ 0.32
LTBR-201ENST00000228918 TREML2Q5T2D2 321 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 CDR2LQ86X02 465 aaPredicted RBP17.02■□□□□ 0.32
LTBR-201ENST00000228918 HSPH1Q92598 858 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 MCRS1Q96EZ8 462 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 FZD8Q9H461 694 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 HMGXB4Q9UGU5 601 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 CHMP2BQ9UQN3 213 aa17.02■□□□□ 0.32
LTBR-201ENST00000228918 KIF3CO14782 793 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 LGR5O75473 907 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ARIH2O95376 493 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 PTPN11Q06124 597 aaPredicted RBP17.01■□□□□ 0.31
LTBR-201ENST00000228918 DPYSL3Q14195 570 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ACAP1Q15027 740 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ZNF449Q6P9G9 518 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 TMEM192Q8IY95 271 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 SPATA18Q8TC71 538 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ZNF570Q96NI8 536 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 GPR20Q99678 358 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 CDT1Q9H211 546 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 VPS11Q9H270 941 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 SMYD3Q9H7B4 428 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 SLC17A7Q9P2U7 560 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 WDR91A4D1P6 747 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 GOLGA8RI6L899 631 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 TRAFD1O14545 582 aaPredicted RBP17.01■□□□□ 0.31
LTBR-201ENST00000228918 MICAL2O94851 1124 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 IL18RAPO95256 599 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 CBX6O95503 412 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 TROVE2P10155 538 aaKnown RBP eCLIP17.01■□□□□ 0.31
LTBR-201ENST00000228918 GABRB2P47870 512 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 NRLP54845 237 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 TAF1BQ53T94 588 aaPredicted RBP17.01■□□□□ 0.31
LTBR-201ENST00000228918 PLEKHG4Q58EX7 1191 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 IGDCC3Q8IVU1 814 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 TMEM130Q8N3G9 435 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 C1orf127Q8N9H9 656 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ZNF668Q96K58 619 aaPredicted RBP17.01■□□□□ 0.31
LTBR-201ENST00000228918 PEBP4Q96S96 227 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 CYTH2Q99418 400 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
LTBR-201ENST00000228918 CALN1Q9BXU9 219 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ELOVL4Q9GZR5 314 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 C12orf65Q9H3J6 166 aaKnown RBP17.01■□□□□ 0.31
LTBR-201ENST00000228918 RSAD1Q9HA92 442 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 KANSL3Q9P2N6 904 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 ZFP69BQ9UJL9 534 aa17.01■□□□□ 0.31
LTBR-201ENST00000228918 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17■□□□□ 0.31
LTBR-201ENST00000228918 INO80B-WBP1J3KQ70 363 aa17■□□□□ 0.31
LTBR-201ENST00000228918 FZD9O00144 591 aa17■□□□□ 0.31
LTBR-201ENST00000228918 RNF8O76064 485 aa17■□□□□ 0.31
LTBR-201ENST00000228918 ECM2O94769 699 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms