RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 WDR60Q8WVS4 1066 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 FAM84AQ96KN4 292 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SLC13A1Q9BZW2 595 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SNX25Q9H3E2 840 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 MANSC1Q9H8J5 431 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 ZNF711Q9Y462 761 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 NCANO14594 1321 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 TGFB1I1O43294 461 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 GAS2O43903 313 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 SLC26A2P50443 739 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 TMPRSS15P98073 1019 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SMAD1Q15797 465 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 TREML2Q5T2D2 321 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 TTC7BQ86TV6 843 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 NOP9Q86U38 636 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 RBM12BQ8IXT5 1001 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 ARRDC4Q8NCT1 418 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SLC7A6OSQ96CW6 309 aaPredicted RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 FAM111AQ96PZ2 611 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 PCDHB18PQ96TA0 734 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 SMG5Q9UPR3 1016 aaKnown RBP12.03□□□□□ -0.48
CCND1-201ENST00000227507 INPP5FQ9Y2H2 1132 aa12.03□□□□□ -0.48
CCND1-201ENST00000227507 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.48
CCND1-201ENST00000227507 PGM3O95394 542 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 CTSHP09668 335 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 AP2B1P63010 937 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 CAV1Q03135 178 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 CENPUQ71F23 418 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 PCSK9Q8NBP7 692 aaKnown RBP12.02□□□□□ -0.48
CCND1-201ENST00000227507 PI4K2AQ9BTU6 479 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 TMEM120AQ9BXJ8 343 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 C10orf88Q9H8K7 445 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 PRKAG3Q9UGI9 489 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 AGO2Q9UKV8 859 aaKnown RBP12.02□□□□□ -0.48
CCND1-201ENST00000227507 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 GSC2O15499 205 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 SSTR1P30872 391 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 HOXD13P35453 343 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 SP3Q02447 781 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 MED21Q13503 144 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 RABGAP1LQ5R372 815 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 TCP10LQ8TDR4 215 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 AFG1LQ8WV93 481 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 OSBPL8Q9BZF1 889 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 AAASQ9NRG9 546 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 RAB20Q9NX57 234 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 TRIM17Q9Y577 477 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.48
CCND1-201ENST00000227507 PLIN4Q96Q06 1357 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 BASP1P80723 227 aaKnown RBP12.02□□□□□ -0.49
CCND1-201ENST00000227507 DSG1Q02413 1049 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 C11orf63Q6NUN7 778 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 LRRC71Q8N4P6 559 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 SNCAIPQ9Y6H5 919 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 SLC15A5A6NIM6 579 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 INHBAP08476 426 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 AMPD1P23109 780 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 NR1H3Q13133 447 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 MMEL1Q495T6 779 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 LMBRD2Q68DH5 695 aaPredicted RBP12.02□□□□□ -0.49
CCND1-201ENST00000227507 C3orf62Q6ZUJ4 267 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 RIBC1Q8N443 379 aaPredicted RBP12.02□□□□□ -0.49
CCND1-201ENST00000227507 PRPF31Q8WWY3 499 aaKnown RBP12.02□□□□□ -0.49
CCND1-201ENST00000227507 PRDM5Q9NQX1 630 aaPredicted RBP12.02□□□□□ -0.49
CCND1-201ENST00000227507 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
CCND1-201ENST00000227507 AFG3L2Q9Y4W6 797 aa12.02□□□□□ -0.49
CCND1-201ENST00000227507 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 SPECC1L-ADORA2AF8WAN1 911 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 KRT1P04264 644 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 AKR1A1P14550 325 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 TMEM62Q0P6H9 643 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 ASPHQ12797 758 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 NOL9Q5SY16 702 aaKnown RBP12.01□□□□□ -0.49
CCND1-201ENST00000227507 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.01□□□□□ -0.49
CCND1-201ENST00000227507 DNAJC1Q96KC8 554 aaKnown RBP12.01□□□□□ -0.49
CCND1-201ENST00000227507 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 CYP26B1Q9NR63 512 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 USP20Q9Y2K6 914 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 MARF1Q9Y4F3 1742 aaKnown RBP12.01□□□□□ -0.49
CCND1-201ENST00000227507 BTBD19C9JJ37 291 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 LYNP07948 512 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 BGNP21810 368 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 PHBP35232 272 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 LBX2Q6XYB7 198 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 ARID3BQ8IVW6 561 aaPredicted RBP12.01□□□□□ -0.49
CCND1-201ENST00000227507 ARHGAP18Q8N392 663 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
CCND1-201ENST00000227507 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms