RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TRAPPC11Q7Z392 1133 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 MON1AQ86VX9 555 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 FAM114A1Q8IWE2 563 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 MAB21L3Q8N8X9 362 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 STKLD1Q8NE28 680 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 MRPS31Q92665 395 aaKnown RBP19.21■□□□□ 0.67
PFN1-201ENST00000225655 CCDC127Q96BQ5 260 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 CGRRF1Q99675 332 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 TDP1Q9NUW8 608 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
PFN1-201ENST00000225655 GREB1Q4ZG55 1949 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 AKAP3O75969 853 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 DLATP10515 647 aaKnown RBP19.2■□□□□ 0.66
PFN1-201ENST00000225655 TNNI1P19237 187 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 WARSP23381 471 aaKnown RBP19.2■□□□□ 0.66
PFN1-201ENST00000225655 LMO2P25791 158 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 NRLP54845 237 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 TNK2Q07912 1038 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 MAPRE1Q15691 268 aaKnown RBP19.2■□□□□ 0.66
PFN1-201ENST00000225655 CCDC142Q17RM4 750 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 ITPRIPL2Q3MIP1 535 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 DGKKQ5KSL6 1271 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 TXNDC8Q6A555 127 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 TXNDC11Q6PKC3 985 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 C4orf50Q6ZRC1 276 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 FILIP1Q7Z7B0 1213 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 ZC3H3Q8IXZ2 948 aaKnown RBP19.2■□□□□ 0.66
PFN1-201ENST00000225655 SPEM1Q8N4L4 309 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 TTC8Q8TAM2 541 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 TMC2Q8TDI7 906 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 USP13Q92995 863 aaPredicted RBP19.2■□□□□ 0.66
PFN1-201ENST00000225655 HINFPQ9BQA5 517 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 FAM83CQ9BQN1 747 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 SYT15Q9BQS2 421 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 EPC1Q9H2F5 836 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 MAGEC2Q9UBF1 373 aaPredicted RBP19.2■□□□□ 0.66
PFN1-201ENST00000225655 CCL26Q9Y258 94 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 WDR87Q6ZQQ6 2873 aa19.2■□□□□ 0.66
PFN1-201ENST00000225655 PTPRDP23468 1912 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 GPR179Q6PRD1 2367 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 ATP2C2O75185 946 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 TADA3O75528 432 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 CXCL12P48061 93 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 CASP4P49662 377 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 VAMP7P51809 220 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 GAS6Q14393 721 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 ZNF268Q14587 947 aaPredicted RBP19.19■□□□□ 0.66
PFN1-201ENST00000225655 WDR44Q5JSH3 913 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 CEP295NLQ96MC4 621 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 MMS19Q96T76 1030 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 DUSP9Q99956 384 aaKnown RBP19.19■□□□□ 0.66
PFN1-201ENST00000225655 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 SRRTQ9BXP5 876 aaKnown RBP19.19■□□□□ 0.66
PFN1-201ENST00000225655 GKN1Q9NS71 199 aa19.19■□□□□ 0.66
PFN1-201ENST00000225655 ARMCX3Q9UH62 379 aaPredicted RBP19.19■□□□□ 0.66
PFN1-201ENST00000225655 ANAPC1Q9H1A4 1944 aa19.18■□□□□ 0.66
PFN1-201ENST00000225655 CST3P01034 146 aaPredicted RBP19.18■□□□□ 0.66
PFN1-201ENST00000225655 FAM163BP0C2L3 166 aa19.18■□□□□ 0.66
PFN1-201ENST00000225655 PSMC1P62191 440 aaKnown RBP19.18■□□□□ 0.66
PFN1-201ENST00000225655 CCINQ13939 588 aa19.18■□□□□ 0.66
PFN1-201ENST00000225655 ANO6Q4KMQ2 910 aa19.18■□□□□ 0.66
PFN1-201ENST00000225655 ENOX1Q8TC92 643 aaKnown RBP19.18■□□□□ 0.66
PFN1-201ENST00000225655 SPATA17Q96L03 361 aa19.18■□□□□ 0.66
PFN1-201ENST00000225655 GZF1Q9H116 711 aaPredicted RBP19.18■□□□□ 0.66
PFN1-201ENST00000225655 CRTAC1Q9NQ79 661 aa19.18■□□□□ 0.66
PFN1-201ENST00000225655 RBM12Q9NTZ6 932 aaKnown RBP19.18■□□□□ 0.66
PFN1-201ENST00000225655 IKBKBO14920 756 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 TACC1O75410 805 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 PAPSS2O95340 614 aaPredicted RBP19.17■□□□□ 0.66
PFN1-201ENST00000225655 STAU1O95793 577 aaKnown RBP19.17■□□□□ 0.66
PFN1-201ENST00000225655 PDGFRBP09619 1106 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 ID4P47928 161 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 SATB1Q01826 763 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 MYL5Q02045 173 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 PON2Q15165 354 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 TCERG1LQ5VWI1 586 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 SCN4BQ8IWT1 228 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 KIAA2013Q8IYS2 634 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 SYNPOQ8N3V7 929 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 MYCBPAPQ8TBZ2 947 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 MYLPFQ96A32 169 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 EEF2KMTQ96G04 330 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 THAP9Q9H5L6 903 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 HPS4Q9NQG7 708 aa19.17■□□□□ 0.66
PFN1-201ENST00000225655 SMG5Q9UPR3 1016 aaKnown RBP19.17■□□□□ 0.66
PFN1-201ENST00000225655 SMTNL1A8MU46 457 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 PHACTR2O75167 634 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 GNL1P36915 607 aaPredicted RBP19.16■□□□□ 0.66
PFN1-201ENST00000225655 TNNC1P63316 161 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 TPM4P67936 248 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 FOXK2Q01167 660 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 RUNX3Q13761 415 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 DCAF17Q5H9S7 520 aaPredicted RBP19.16■□□□□ 0.66
PFN1-201ENST00000225655 CC2D1AQ6P1N0 951 aaPredicted RBP19.16■□□□□ 0.66
PFN1-201ENST00000225655 Q6ZS52 159 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 C11orf57Q6ZUT1 292 aaPredicted RBP19.16■□□□□ 0.66
PFN1-201ENST00000225655 CREBRFQ8IUR6 639 aa19.16■□□□□ 0.66
PFN1-201ENST00000225655 DCLK2Q8N568 766 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms