RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 CASD1Q96PB1 797 aa17.66■□□□□ 0.42
TVP23C-201ENST00000225576 CNPY3Q9BT09 278 aa17.66■□□□□ 0.42
TVP23C-201ENST00000225576 PPP1R12CQ9BZL4 782 aa17.66■□□□□ 0.42
TVP23C-201ENST00000225576 ASNSD1Q9NWL6 643 aa17.66■□□□□ 0.42
TVP23C-201ENST00000225576 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
TVP23C-201ENST00000225576 STIM2Q9P246 746 aa17.66■□□□□ 0.42
TVP23C-201ENST00000225576 DMGDHQ9UI17 866 aaKnown RBP17.66■□□□□ 0.42
TVP23C-201ENST00000225576 MTUS1Q9ULD2 1270 aa17.66■□□□□ 0.42
TVP23C-201ENST00000225576 MYBPHLA2RUH7 354 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 PIK3R2O00459 728 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 CLDN5O00501 218 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 ERLIN1O75477 346 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 FAM200BP0CF97 657 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 CYP2C18P33260 490 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 HADHQ16836 314 aaKnown RBP17.65■□□□□ 0.42
TVP23C-201ENST00000225576 OVOS1Q6IE37 1185 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 FAM171BQ6P995 826 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 TMCO3Q6UWJ1 677 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 SLC26A9Q7LBE3 791 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 SCUBE3Q8IX30 993 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 ARFGAP1Q8N6T3 406 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 HASPINQ8TF76 798 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 HDAC7Q8WUI4 952 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 RXFP2Q8WXD0 754 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 KHSRPQ92945 711 aaKnown RBP eCLIP17.65■□□□□ 0.425e-10■■■□□ 16.2
TVP23C-201ENST00000225576 PCED1BQ96HM7 432 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 MED10Q9BTT4 135 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 NR2E1Q9Y466 385 aa17.65■□□□□ 0.42
TVP23C-201ENST00000225576 TDRD15B5MCY1 1934 aaKnown RBP17.64■□□□□ 0.41
TVP23C-201ENST00000225576 DPYSL4O14531 572 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 LRCH4O75427 683 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 RNF8O76064 485 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 KRT7P08729 469 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 PDGFRAP16234 1089 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 PCK1P35558 622 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 CETN2P41208 172 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 OR1G1P47890 313 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 CYP1B1Q16678 543 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 CCDC142Q17RM4 750 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 INTS6LQ5JSJ4 861 aaKnown RBP17.64■□□□□ 0.41
TVP23C-201ENST00000225576 CLEC20AQ6ZU45 233 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 NPAS4Q8IUM7 802 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 CCDC26Q8TAB7 109 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 RBM41Q96IZ5 413 aaKnown RBP17.64■□□□□ 0.41
TVP23C-201ENST00000225576 PIWIL1Q96J94 861 aaKnown RBP17.64■□□□□ 0.41
TVP23C-201ENST00000225576 UBXN6Q9BZV1 441 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 DDX47Q9H0S4 455 aaKnown RBP17.64■□□□□ 0.41
TVP23C-201ENST00000225576 C11orf49Q9H6J7 331 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 ARFGAP3Q9NP61 516 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 TMEM39AQ9NV64 488 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.64■□□□□ 0.419e-7■□□□□ 8.5
TVP23C-201ENST00000225576 ATP11BQ9Y2G3 1177 aa17.64■□□□□ 0.41
TVP23C-201ENST00000225576 RAD51CO43502 376 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 CLTBP09497 229 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 TCF4P15884 667 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 RFC2P35250 354 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 FLT3P36888 993 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 COPS2P61201 443 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 SLC7A5Q01650 507 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 SLC25A11Q02978 314 aaKnown RBP17.63■□□□□ 0.41
TVP23C-201ENST00000225576 SIX1Q15475 284 aaPredicted RBP17.63■□□□□ 0.41
TVP23C-201ENST00000225576 MAPRE1Q15691 268 aaKnown RBP17.63■□□□□ 0.41
TVP23C-201ENST00000225576 TRNP1Q6NT89 227 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
TVP23C-201ENST00000225576 MAATS1Q7Z4T9 603 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 FAM35AQ86V20 835 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 PRELID2Q8N945 189 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 PKMYT1Q99640 499 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 NCAPGQ9BPX3 1015 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 MRPL9Q9BYD2 267 aaKnown RBP17.63■□□□□ 0.41
TVP23C-201ENST00000225576 NRDE2Q9H7Z3 1164 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 KRT82Q9NSB4 513 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 CENPFP49454 3210 aa17.63■□□□□ 0.41
TVP23C-201ENST00000225576 F8W810 466 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 PHF2O75151 1096 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 AP1G2O75843 785 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 BEST1O76090 585 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 RARAP10276 462 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 LCP1P13796 627 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 TNFRSF8P28908 595 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 CHRNA3P32297 505 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
TVP23C-201ENST00000225576 ATP13A4Q4VNC1 1196 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 EFHC1Q5JVL4 640 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 CNKSR3Q6P9H4 555 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 ADAT2Q7Z6V5 191 aaKnown RBP17.62■□□□□ 0.41
TVP23C-201ENST00000225576 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
TVP23C-201ENST00000225576 SMARCD1Q96GM5 515 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 ABHD8Q96I13 439 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 LRRC4Q9HBW1 653 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 GDF3Q9NR23 364 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 TCRBV7S2A1N4TA0A589 114 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 SYN3O14994 580 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 TADA2AO75478 443 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 GRAP2O75791 330 aa17.62■□□□□ 0.41
TVP23C-201ENST00000225576 HEXIM1O94992 359 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms