RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 RUSC1Q9BVN2 902 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 NMRK1Q9NWW6 199 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 UNC13BO14795 1591 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 TBKBP1A7MCY6 615 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 HOXA2O43364 376 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 RHOBTB3O94955 611 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 FAXCQ5TGI0 409 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 MYO1HQ8N1T3 1032 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 C9orf72Q96LT7 481 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 OSGEPL1Q9H4B0 414 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 APPL1Q9UKG1 709 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 FBXL21Q9UKT6 434 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CAND2O75155 1236 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 GUCA1AP43080 201 aaPredicted RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 DDX39BQ13838 428 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CYP51A1Q16850 503 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 AASDHQ4L235 1098 aaPredicted RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 DDX42Q86XP3 938 aaKnown RBP eCLIP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 MIB1Q86YT6 1006 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 OSBPL8Q9BZF1 889 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 STARD7Q9NQZ5 370 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CNTNAP5Q8WYK1 1306 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CNTNAP2Q9UHC6 1331 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 DEAF1O75398 565 aaPredicted RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 VPS26AO75436 327 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 HPGDP15428 266 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 FAM83EQ2M2I3 478 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ZNF284Q2VY69 593 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ARHGAP17Q68EM7 881 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 FAM136AQ96C01 138 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 FICDQ9BVA6 458 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CCSER1Q9C0I3 900 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ADARB2Q9NS39 739 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 DSEQ9UL01 958 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 GRID1Q9ULK0 1009 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 MTO1Q9Y2Z2 717 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 AAR2Q9Y312 384 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 RAD51CO43502 376 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 RHOCP08134 193 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 TGM2P21980 687 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 ANXA11P50995 505 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 C16orf72Q14CZ0 275 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 AGAP9Q5VTM2 703 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 STAMBPL1Q96FJ0 436 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SERAC1Q96JX3 654 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 TARS2Q9BW92 718 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 CELF4Q9BZC1 486 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 PCDHB2Q9Y5E7 798 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SERPINB5P36952 375 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 MPZL3Q6UWV2 235 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 VN1R5Q7Z5H4 357 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 TRIM69Q86WT6 500 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 EXOSC4Q9NPD3 245 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SNX8Q9Y5X2 465 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 COPG1Q9Y678 874 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 RRM2P31350 389 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 KRT20P35900 424 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 TUBE1Q9UJT0 475 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 TDRKHQ9Y2W6 561 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 TSPAN3O60637 253 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 NBNO60934 754 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 GRK3P35626 688 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■■■ 27.8
KNOP1-201ENST00000219837 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SLFN11Q7Z7L1 901 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 ITIH5Q86UX2 942 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 KIRREL3Q8IZU9 778 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SGF29Q96ES7 293 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 AHCYL2Q96HN2 611 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SLC12A8A0AV02 714 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 KLRC2P26717 231 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 COILP38432 576 aaPredicted RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 SF3B3Q15393 1217 aaKnown RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
KNOP1-201ENST00000219837 CNDP1Q96KN2 507 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 RIT2Q99578 217 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 PDGFCQ9NRA1 345 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 KRT84Q9NSB2 600 aa11.49□□□□□ -0.57
KNOP1-201ENST00000219837 CASZ1Q86V15 1759 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 SPTLC1O15269 473 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 MTSS1O43312 755 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 PSTPIP1O43586 416 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 TNNI3P19429 210 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 SERPINB8P50452 374 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 RD3Q7Z3Z2 195 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 A0A1B0GTH6 734 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 USP1O94782 785 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 MAPK1P28482 360 aa11.48□□□□□ -0.57
KNOP1-201ENST00000219837 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms