RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 WDTC1Q8N5D0 677 aa28.8■■■□□ 2.2
CHMP4B-201ENST00000217402 BAG1Q99933 345 aaPredicted RBP28.8■■■□□ 2.2
CHMP4B-201ENST00000217402 LHX5Q9H2C1 402 aa28.8■■■□□ 2.2
CHMP4B-201ENST00000217402 ADAMTS1Q9UHI8 967 aa28.8■■■□□ 2.2
CHMP4B-201ENST00000217402 CYTH4Q9UIA0 394 aa28.8■■■□□ 2.2
CHMP4B-201ENST00000217402 DDX3XO00571 662 aaKnown RBP eCLIP28.79■■■□□ 2.22e-12■■■■■ 26.8
CHMP4B-201ENST00000217402 ALDH1A3P47895 512 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 RGS7P49802 495 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 RPL10AP62906 217 aaKnown RBP28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 TWF1Q12792 350 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 CYP26C1Q6V0L0 522 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 TRIM72Q6ZMU5 477 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 PIGZQ86VD9 579 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 TMEM35BQ8NCS4 154 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 GIPC2Q8TF65 315 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 CPA5Q8WXQ8 436 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 C8orf48Q96LL4 319 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 GUCD1Q96NT3 240 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 PLEKHA4Q9H4M7 779 aa28.79■■■□□ 2.2
CHMP4B-201ENST00000217402 XPO1O14980 1071 aaKnown RBP28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 LINC01565O15544 149 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 LSM8O95777 96 aaKnown RBP28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 C1RP00736 705 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 NOMO3P69849 1222 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 MAPK8IP2Q13387 824 aaPredicted RBP28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 PMF1Q6P1K2 205 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 SLC35F5Q8WV83 523 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 CCDC42Q96M95 316 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 ST7Q9NRC1 585 aa28.78■■■□□ 2.2
CHMP4B-201ENST00000217402 SSU72P8A0A1W2PR75 194 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 RFPL2O75678 378 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 CYP1A1P04798 512 aaPredicted RBP28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 FECHP22830 423 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 PLA2G4AP47712 749 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 CLEC16AQ2KHT3 1053 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 PPM1LQ5SGD2 360 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 GPRIN1Q7Z2K8 1008 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 EFHBQ8N7U6 833 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 MYH10P35580 1976 aa28.77■■■□□ 2.2
CHMP4B-201ENST00000217402 SOWAHDA6NJG2 315 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 TMCO5BA8MYB1 307 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 PIK3R2O00459 728 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 LRG1P02750 347 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 CDH5P33151 784 aaPredicted RBP28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 PDCLQ13371 301 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 KCNC3Q14003 757 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 TMEM139Q8IV31 216 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 SLC30A5Q8TAD4 765 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 PPP1R9BQ96SB3 815 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 DPP7Q9UHL4 492 aa28.76■■■□□ 2.2
CHMP4B-201ENST00000217402 A0A087X0T9 212 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 HHLA1C9JL84 531 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 AKR1B10O60218 316 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 ZMYND10O75800 440 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 GLP2RO95838 553 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 FAM228BP0C875 321 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 KIF11P52732 1056 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 GFPT1Q06210 699 aaPredicted RBP28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 IFRD2Q12894 506 aaPredicted RBP28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 ELMSAN1Q6PJG2 1045 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 TMTC1Q8IUR5 882 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 LRRC8AQ8IWT6 810 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 CASP10Q92851 521 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 SPTLC3Q9NUV7 552 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 TAS2R14Q9NYV8 317 aa28.76■■■□□ 2.19
CHMP4B-201ENST00000217402 UNGP13051 313 aaPredicted RBP28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 FOSL2P15408 326 aa28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 SLC5A3P53794 718 aa28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 PLD1Q13393 1074 aa28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 MTMR3Q13615 1198 aa28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 ASTE1Q2TB18 679 aaPredicted RBP28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 HDAC7Q8WUI4 952 aa28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 NOX5Q96PH1 765 aa28.75■■■□□ 2.19
CHMP4B-201ENST00000217402 CCL16O15467 120 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 NSFP46459 744 aaKnown RBP28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 EPHB3P54753 998 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 VEPH1Q14D04 833 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 DNAAF5Q86Y56 855 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 SPATA17Q96L03 361 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 CPXM1Q96SM3 734 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 PNPLA8Q9NP80 782 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 MTMR10Q9NXD2 777 aa28.74■■■□□ 2.19
CHMP4B-201ENST00000217402 CENPCQ03188 943 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 MTF1Q14872 753 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 PTPN20Q4JDL3 420 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 EP400NLQ6ZTU2 488 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 DENND5BQ6ZUT9 1274 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 C12orf76Q8N812 135 aaPredicted RBP28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 SCAMP5Q8TAC9 235 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 PPP1R13BQ96KQ4 1090 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 SYNCQ9H7C4 482 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 LRRC4Q9HBW1 653 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 TJP2Q9UDY2 1190 aa28.73■■■□□ 2.19
CHMP4B-201ENST00000217402 SLC38A8A6NNN8 435 aa28.72■■■□□ 2.19
CHMP4B-201ENST00000217402 TNFRSF10BO14763 440 aa28.72■■■□□ 2.19
CHMP4B-201ENST00000217402 SRGAP2BP0DMP2 458 aa28.72■■■□□ 2.19
CHMP4B-201ENST00000217402 LCP1P13796 627 aa28.72■■■□□ 2.19
CHMP4B-201ENST00000217402 ADIGQ0VDE8 80 aa28.72■■■□□ 2.19
CHMP4B-201ENST00000217402 SLC18A3Q16572 532 aa28.72■■■□□ 2.19
CHMP4B-201ENST00000217402 C2CD6Q53TS8 623 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms