RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ATP11AP98196 1134 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CDC42EP1Q00587 391 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 C9orf57Q5W0N0 161 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CROCCP2Q86T23 111 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 RFX6Q8HWS3 928 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ZCCHC9Q8N567 271 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 TTC39CQ8N584 583 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CCHCR1Q8TD31 782 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 NKD2Q969F2 451 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 PKNOX2Q96KN3 472 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CFAP57Q96MR6 1250 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ASNSD1Q9NWL6 643 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 KIAA1257Q9ULG3 409 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 HTTP42858 3142 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 FOXO6A8MYZ6 492 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM107AO95990 144 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 PECAM1P16284 738 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 SOWAHAQ2M3V2 549 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ALKAL1Q6UXT8 129 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 TAB3Q8N5C8 712 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 C7orf31Q8N865 590 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ROPN1BQ9BZX4 212 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ROPN1Q9HAT0 212 aaPredicted RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 DRG1Q9Y295 367 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 A8MXQ7 604 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 MYO1CO00159 1063 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 PDGFRBP09619 1106 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CDR1P51861 262 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 FASTKD3Q14CZ7 662 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 ZNF618Q5T7W0 954 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 MFSD5Q6N075 450 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CHADLQ6NUI6 762 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 BBS12Q6ZW61 710 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 B4GALNT4Q76KP1 1039 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 LRRC52Q8N7C0 313 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 CNPY3Q9BT09 278 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 B3GNT5Q9BYG0 378 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 MIS12Q9H081 205 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 SAYSD1Q9NPB0 183 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 TBK1Q9UHD2 729 aa8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 TPX2Q9ULW0 747 aaKnown RBP8.37□□□□□ -1.07
HMGXB4-201ENST00000216106 SMIM28A0A1B0GU29 152 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 GMNCA6NCL1 334 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 GOLGA8MH3BSY2 632 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 HAS3O00219 553 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 SPTLC1O15269 473 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CCDC130P13994 396 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 MAGEA4P43358 317 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CDH6P55285 790 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 ACAP1Q15027 740 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 STILQ15468 1287 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 TNFAIP8L3Q5GJ75 292 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 FBXO47Q5MNV8 452 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 OLFML1Q6UWY5 402 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CYP4V2Q6ZWL3 525 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CMASQ8NFW8 434 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 STMN4Q9H169 189 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM124BQ9H5Z6 455 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 NGRNQ9NPE2 291 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 NMRK2Q9NPI5 230 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 HESX1Q9UBX0 185 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 UBQLN1Q9UMX0 589 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 EFR3BQ9Y2G0 817 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 TRPM7Q96QT4 1865 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 LMO2P25791 158 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 SOX4Q06945 474 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 PCBP1Q15365 356 aaKnown RBP eCLIP8.36□□□□□ -1.074e-10■■■■□ 20
HMGXB4-201ENST00000216106 TAZQ16635 292 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM182AQ5T1J6 154 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 SCYL2Q6P3W7 929 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 EXOC3L1Q86VI1 746 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 SERPINB12Q96P63 405 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 FAM169AQ9Y6X4 670 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 C17orf102A2RUQ5 167 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 TRIM66O15016 1216 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 PRPSAP2O60256 369 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 FGFR1P11362 822 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CREB1P16220 341 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 ADORA2BP29275 332 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 PCK1P35558 622 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 NRLP54845 237 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 FSCN1Q16658 493 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 QPCTQ16769 361 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CCDC14Q49A88 953 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 UBXN11Q5T124 520 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 RNASEH2BQ5TBB1 312 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 NPNTQ6UXI9 565 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 TAOK1Q7L7X3 1001 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 CLEC4CQ8WTT0 213 aa8.36□□□□□ -1.07
HMGXB4-201ENST00000216106 SLC35F5Q8WV83 523 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms