RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 AKR1B15C9JRZ8 316 aaPredicted RBP21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 XPO1O14980 1071 aaKnown RBP21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 RTN3O95197 1032 aaPredicted RBP21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 SYCE2Q6PIF2 218 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 NOP9Q86U38 636 aaKnown RBP21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 TTC30AQ86WT1 665 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 NUP93Q8N1F7 819 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 C12orf76Q8N812 135 aaPredicted RBP21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 OR8K1Q8NGG5 319 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 GIPC2Q8TF65 315 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 RIPOR3Q96MK2 946 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 KCNK16Q96T55 309 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 SMOQ99835 787 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 UBXN6Q9BZV1 441 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 ADAM7Q9H2U9 754 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 ASAH2Q9NR71 780 aa21.33■■□□□ 1.01
RHBDD3-201ENST00000216085 MFAP3LO75121 409 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 FGF19O95750 216 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 CALCAP01258 141 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 PTPN2P17706 415 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 LTBRP36941 435 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 GPR15P49685 360 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 CACNA2D1P54289 1103 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 CDR2Q01850 454 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 DLX2Q07687 328 aaPredicted RBP21.33■■□□□ 1
RHBDD3-201ENST00000216085 PDE4CQ08493 712 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 KLHL30Q0D2K2 578 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 ATAT1Q5SQI0 421 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 TAF3Q5VWG9 929 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 TRIM72Q6ZMU5 477 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 GPR149Q86SP6 731 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 VPS36Q86VN1 386 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 UBA3Q8TBC4 463 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 SECISBP2LQ93073 1101 aaKnown RBP21.33■■□□□ 1
RHBDD3-201ENST00000216085 MSLNLQ96KJ4 702 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 ZSWIM1Q9BR11 485 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 LHX5Q9H2C1 402 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 MYH10P35580 1976 aa21.33■■□□□ 1
RHBDD3-201ENST00000216085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.32■■□□□ 1
RHBDD3-201ENST00000216085 SLC38A8A6NNN8 435 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 PAPLNO95428 1278 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 LSM8O95777 96 aaKnown RBP21.32■■□□□ 1
RHBDD3-201ENST00000216085 PLA2G4AP47712 749 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 SNX16P57768 344 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 TDRD12Q587J7 1177 aaKnown RBP21.32■■□□□ 1
RHBDD3-201ENST00000216085 CYP4A22Q5TCH4 519 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 TMEM35BQ8NCS4 154 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 MSANTD4Q8NCY6 345 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 NECTIN4Q96NY8 510 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 GCNAQ96QF7 691 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 APOL5Q9BWW9 433 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 FBXO44Q9H4M3 255 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 COMMD8Q9NX08 183 aa21.32■■□□□ 1
RHBDD3-201ENST00000216085 NOCTQ9UK39 431 aaKnown RBP21.32■■□□□ 1
RHBDD3-201ENST00000216085 BRWD1Q9NSI6 2320 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 PRKCIP41743 596 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 MTHFRP42898 656 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 SLC5A3P53794 718 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 TBX2Q13207 712 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 PKDCCQ504Y2 493 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 SDHAF4Q5VUM1 108 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 IRF2BP2Q7Z5L9 587 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 DNAJB7Q7Z6W7 309 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 PIGZQ86VD9 579 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 GPIHBP1Q8IV16 184 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 SMRP1Q8NCR6 262 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 GPR152Q8TDT2 470 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 ZNF707Q96C28 371 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 LRRC4Q9HBW1 653 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 SEPT11Q9NVA2 429 aaKnown RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 IMPACTQ9P2X3 320 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 MAGED2Q9UNF1 606 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 FAM50BQ9Y247 325 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 REV3LO60673 3130 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 H3BQ06 376 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 BEST1O76090 585 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 SERPING1P05155 500 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 SSTR3P32745 418 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 PABPC1LQ4VXU2 614 aaKnown RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 PDZD4Q76G19 769 aaPredicted RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 PASD1Q8IV76 773 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 ZMIZ2Q8NF64 920 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 DDX1Q92499 740 aaKnown RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 TRMT2BQ96GJ1 504 aaKnown RBP21.31■■□□□ 1
RHBDD3-201ENST00000216085 SLITRK1Q96PX8 696 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 DNAJC7Q99615 494 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 CORO1BQ9BR76 489 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 ABHD10Q9NUJ1 306 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 TMEM30AQ9NV96 361 aa21.31■■□□□ 1
RHBDD3-201ENST00000216085 ZNF197O14709 1029 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 MMEP08473 750 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 GPD2P43304 727 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 SMAD4Q13485 552 aaKnown RBP21.3■■□□□ 1
RHBDD3-201ENST00000216085 CLUL1Q15846 466 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 DENND1BQ6P3S1 775 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 SIX6OS1Q8N1H7 587 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 STK32AQ8WU08 396 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 HSFY1Q96LI6 401 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 AGPAT1Q99943 283 aa21.3■■□□□ 1
RHBDD3-201ENST00000216085 HAUS4Q9H6D7 363 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms