RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR6P1Q8NGX9 317 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 GANCQ8TET4 914 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 ATG4AQ8WYN0 398 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 PGM2Q96G03 612 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 ECSITQ9BQ95 431 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TUFT1Q9NNX1 390 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 GMEB1Q9Y692 573 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 AK5Q9Y6K8 562 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 CROCC2H7BZ55 1655 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TOMM70O94826 608 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 SEMA3DO95025 777 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 RTN3O95197 1032 aaPredicted RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 FMO5P49326 533 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 SCNN1BP51168 640 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 BLMHQ13867 455 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 KLHDC7AQ5VTJ3 777 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 GPD1LQ8N335 351 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 SUN5Q8TC36 379 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 EPAS1Q99814 870 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 LXNQ9BS40 222 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 THAP2Q9H0W7 228 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 EPB41L4AQ9HCS5 686 aaPredicted RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 CTNNAL1Q9UBT7 734 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 RSL24D1Q9UHA3 163 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 GLI2P10070 1586 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 M0QYV0 167 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 PEX1O43933 1283 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 NMT2O60551 498 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 PLIN5Q00G26 463 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 MTFR1Q15390 333 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 ERMARDQ5T6L9 678 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 SWSAP1Q6NVH7 229 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 TTC27Q6P3X3 843 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 KLHL17Q6TDP4 642 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 CD302Q8IX05 232 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 IARS2Q9NSE4 1012 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 USP31Q70CQ4 1352 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 CCDC78A2IDD5 438 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 GSG1L2A8MUP6 293 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 FAM25AB3EWG3 89 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 FAM25CB3EWG5 89 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 FAM25GB3EWG6 89 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 AKR1D1P51857 326 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 TBCELQ5QJ74 424 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 FAM102AQ5T9C2 384 aaPredicted RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 RRM2BQ7LG56 351 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.82□□□□□ -0.68
VCL-201ENST00000211998 C1orf131Q8NDD1 294 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 DGCR14Q96DF8 476 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 QKIQ96PU8 341 aaKnown RBP eCLIP10.82□□□□□ -0.681e-26■■■■□ 23.1
VCL-201ENST00000211998 PAFAH2Q99487 392 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 EGFL8Q99944 293 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 LRMDAQ9H2I8 198 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 COPS7BQ9H9Q2 264 aaPredicted RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 FAM32AQ9Y421 112 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 CNOT3O75175 753 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 TDP2O95551 362 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 CASP5P51878 434 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 CDC42EP1Q00587 391 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 CSTF3Q12996 717 aaKnown RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 SPP2Q13103 211 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 ANGPT1Q15389 498 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 TRIP4Q15650 581 aaPredicted RBP10.82□□□□□ -0.68
VCL-201ENST00000211998 SCN4BQ8IWT1 228 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 KYQ8NBH2 561 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 IL25Q9H293 177 aa10.82□□□□□ -0.68
VCL-201ENST00000211998 CYTH3O43739 400 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 EIF2S1P05198 315 aaKnown RBP10.81□□□□□ -0.68
VCL-201ENST00000211998 GNL1P36915 607 aaPredicted RBP10.81□□□□□ -0.68
VCL-201ENST00000211998 NNMTP40261 264 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 EFHC2Q5JST6 749 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 TCAIMQ8N3R3 496 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 FBXO36Q8NEA4 188 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 PPHLN1Q8NEY8 458 aaKnown RBP10.81□□□□□ -0.68
VCL-201ENST00000211998 FNIP1Q8TF40 1166 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 DCDC2Q9UHG0 476 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
VCL-201ENST00000211998 MED14O60244 1454 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 CLASP2O75122 1294 aaKnown RBP10.81□□□□□ -0.68
VCL-201ENST00000211998 ITGA4P13612 1032 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 FCHO2Q0JRZ9 810 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 TBX2Q13207 712 aaPredicted RBP10.81□□□□□ -0.68
VCL-201ENST00000211998 TP53BP2Q13625 1128 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 TKFCQ3LXA3 575 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 CREG2Q8IUH2 290 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 POU5F2Q8N7G0 328 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 SLC44A5Q8NCS7 719 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 ELMO2Q96JJ3 720 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 SPATA33Q96N06 139 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 PHF20Q9BVI0 1012 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 NMRK1Q9NWW6 199 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 TELO2Q9Y4R8 837 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 PCDHA10Q9Y5I2 948 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 MYMKA6NI61 221 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
VCL-201ENST00000211998 EYA4O95677 639 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms