RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TNNT3P45378 269 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RPL34P49207 117 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ZDHHC14Q8IZN3 488 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RSPH1Q8WYR4 309 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SYT15Q9BQS2 421 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 B3GNT5Q9BYG0 378 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 STIM2Q9P246 746 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CLDN5O00501 218 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SART1O43290 800 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CYP11A1P05108 521 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CDR1P51861 262 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SLC13A5Q86YT5 568 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 COLGALT2Q8IYK4 626 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 KATNAL2Q8IYT4 538 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RUBCNQ92622 972 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RTP3Q9BQQ7 232 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 DUSP16Q9BY84 665 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 KANSL3Q9P2N6 904 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ADAM21Q9UKJ8 722 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RAD51CO43502 376 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 LRCH4O75427 683 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CXCL10P02778 98 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PAX3P23760 479 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TRNP1Q6NT89 227 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ARFGAP1Q8N6T3 406 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ARMC5Q96C12 935 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SUSD3Q96L08 255 aa20.69■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TCRBV7S2A1N4TA0A589 114 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 MYBPHLA2RUH7 354 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 NPR3P17342 541 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CYP2C18P33260 490 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GJC1P36383 396 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FLT3P36888 993 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PLCB3Q01970 1234 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RNASELQ05823 741 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 LLGL1Q15334 1064 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TAF5Q15542 800 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 LRRC38Q5VT99 294 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SPATA18Q8TC71 538 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PCED1BQ96HM7 432 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CYLDQ9NQC7 956 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 DNAJB4Q9UDY4 337 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CDH9Q9ULB4 789 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PCDHB7Q9Y5E2 793 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GOLGA6L10A0A0M3HER8 536 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 C2CD4BA6NLJ0 364 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 XPO1O14980 1071 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GRAP2O75791 330 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 BEST1O76090 585 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SYF2O95926 243 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GLI1P08151 1106 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 HSPA8P11142 646 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PCSK1P29120 753 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SNX16P57768 344 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SLC6A3Q01959 620 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ATP13A4Q4VNC1 1196 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TXNRD3NBQ6F5E7 133 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FAM43BQ6ZT52 329 aaPredicted RBP20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CLEC20AQ6ZU45 233 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ZDHHC17Q8IUH5 632 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CRIPAKQ8N1N5 446 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 KHSRPQ92945 711 aaKnown RBP eCLIP20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 HSFY1Q96LI6 401 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 VPS18Q9P253 973 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FAN1Q9Y2M0 1017 aa20.68■□□□□ 0.9
TNFRSF1A-201ENST00000162749 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ZNF143P52747 638 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PIGZQ86VD9 579 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ABI1Q8IZP0 508 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PRELID2Q8N945 189 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 EXD1Q8NHP7 514 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PLEKHA4Q9H4M7 779 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 AMACRQ9UHK6 382 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 DSEQ9UL01 958 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TBX21Q9UL17 535 aa20.67■□□□□ 0.9
TNFRSF1A-201ENST00000162749 HEXIM1O94992 359 aaKnown RBP20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PARNO95453 639 aaKnown RBP20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GJA8P48165 433 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SLC25A11Q02978 314 aaKnown RBP20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SIX1Q15475 284 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 MYCBPAPQ8TBZ2 947 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 FAM71BQ8TC56 605 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CLEC4CQ8WTT0 213 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ACBD6Q9BR61 282 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 HERPUD2Q9BSE4 406 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SLITRK6Q9H5Y7 841 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 KRT82Q9NSB4 513 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ZSCAN5CA6NGD5 496 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 TMEM189-UBE2V1I3L0A0 370 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GPD1P21695 349 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GATMP50440 423 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SLC8A3P57103 927 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 METTL23Q86XA0 190 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CCDC50Q8IVM0 306 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 RXFP2Q8WXD0 754 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 MED10Q9BTT4 135 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ACBD3Q9H3P7 528 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 MED4Q9NPJ6 270 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 KLHL11Q9NVR0 708 aa20.66■□□□□ 0.9
TNFRSF1A-201ENST00000162749 ATP11BQ9Y2G3 1177 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms