RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 PAMP19021 973 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 MIPP30301 263 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 NUMBP49757 651 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
HDAC7-201ENST00000080059 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-201ENST00000080059 PDK1Q15118 436 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-201ENST00000080059 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
HDAC7-201ENST00000080059 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 FAM129AQ9BZQ8 928 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 SP110Q9HB58 689 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
HDAC7-201ENST00000080059 RASSF10A6NK89 507 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 PECAM1P16284 738 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 NOMO3P69849 1222 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 PRAMEP78395 509 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 PRUNE1Q86TP1 453 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 AJAP1Q9UKB5 411 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 C3orf70A6NLC5 250 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 RECQL4O94761 1208 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 CYP1A2P05177 515 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 THP07101 528 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 GEMIN4P57678 1058 aaKnown RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 ZNF268Q14587 947 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 TRPM8Q7Z2W7 1104 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 ABI2Q9NYB9 513 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 TNFSF13BQ9Y275 285 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 SNRPAP09012 282 aaKnown RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 TPD52P55327 224 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-201ENST00000080059 MAP3K7CLP57077 242 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 DRP2Q13474 957 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 HELQQ8TDG4 1101 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 ERP27Q96DN0 273 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 TUBB6Q9BUF5 446 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 NCANO14594 1321 aa13.66□□□□□ -0.22
HDAC7-201ENST00000080059 ADSSP30520 456 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 SSTR1P30872 391 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 MORF4L2Q15014 288 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 TTMPQ5BVD1 217 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 FOXR1Q6PIV2 292 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 TSSK1BQ9BXA7 367 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 NAALADL1Q9UQQ1 740 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 ZNF536O15090 1300 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 MYH3P11055 1940 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 PLPPR4Q7Z2D5 763 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 DHX33Q9H6R0 707 aaKnown RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 WDCPQ9H6R7 721 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 BCAP29Q9UHQ4 241 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 RAB44Q7Z6P3 723 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 COG5Q9UP83 839 aa13.65□□□□□ -0.22
HDAC7-201ENST00000080059 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
HDAC7-201ENST00000080059 CHUKO15111 745 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 KLC3Q6P597 504 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 RIBC1Q8N443 379 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-201ENST00000080059 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC7-201ENST00000080059 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
HDAC7-201ENST00000080059 ZNF669Q96BR6 464 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-201ENST00000080059 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 ST6GALNAC4Q9H4F1 302 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 SIX2Q9NPC8 291 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 SMAPO00193 183 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 POMCP01189 267 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 PAEPP09466 180 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 OVGP1Q12889 678 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 SLC12A1Q13621 1099 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 PDK2Q15119 407 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 GPR20Q99678 358 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 PCDH9Q9HC56 1237 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 MROH7Q68CQ1 1323 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 ETS1P14921 441 aa13.64□□□□□ -0.23
HDAC7-201ENST00000080059 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms