RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 C1orf186Q6ZWK4 172 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 PURBQ96QR8 312 aaKnown RBP10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 WDR24Q96S15 920 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 FBXL5Q9UKA1 691 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 LZTS3O60299 673 aaPredicted RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SPRP35270 261 aaPredicted RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 CCZ1BP86790 482 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 CCZ1P86791 482 aaPredicted RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 USP10Q14694 798 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 STARD3Q14849 445 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 PABPC1LQ4VXU2 614 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 PDCD7Q8N8D1 485 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 TPCN2Q8NHX9 752 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 MS4A14Q96JA4 679 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 CIPCQ9C0C6 399 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 CARD9Q9H257 536 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 XAB2Q9HCS7 855 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 PPARGC1AQ9UBK2 798 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 AP4E1Q9UPM8 1137 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SCNN1GP51170 649 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 MAGOHP61326 146 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 TRADDQ15628 312 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 CES5AQ6NT32 575 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 PDZD8Q8NEN9 1154 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SERPINB11Q96P15 392 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 XPO6Q96QU8 1125 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 IGFLR1Q9H665 355 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 NMRK2Q9NPI5 230 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 BLOC1S4Q9NUP1 217 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SF3B1O75533 1304 aaKnown RBP eCLIP10.77□□□□□ -0.696e-6■■■■■ 116.1
NIPAL3-201ENST00000003912 COL1A2P08123 1366 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SLURP2P0DP57 97 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 MLH1P40692 756 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 TBX4P57082 545 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 CLEC16AQ2KHT3 1053 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC39A12Q504Y0 691 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 ADCK2Q7Z695 626 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM71DQ8N9W8 422 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 STN1Q9H668 368 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
NIPAL3-201ENST00000003912 ELNP15502 786 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 PPM1AP35813 382 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 MORF4L2Q15014 288 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 SENP8Q96LD8 212 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 PGLYRP2Q96PD5 576 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 PCDHGB4Q9UN71 923 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 L3MBTL1Q9Y468 752 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 A0A087X0T9 212 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CCDC78A2IDD5 438 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 SMIM22K7EJ46 135 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ZBTB39O15060 712 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CA12O43570 354 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 PMPCBO75439 489 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM228BP0C875 321 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 KCNA2P16389 499 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CTNNB1P35222 781 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 RHOAP61586 193 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 RETSATQ6NUM9 610 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC47A2Q86VL8 602 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM131BQ86XD5 332 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 PPIL6Q8IXY8 311 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 RXFP2Q8WXD0 754 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 TATDN2Q93075 761 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ZBTB45Q96K62 511 aaPredicted RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 SPATA16Q9BXB7 569 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CASS4Q9NQ75 786 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CHORDC1Q9UHD1 332 aaPredicted RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CCDC195A0A1B0GUA6 201 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ZNF185O15231 689 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ACADMP11310 421 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 HMOX2P30519 316 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ITGA7Q13683 1181 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 MTFR1Q15390 333 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 AARS2Q5JTZ9 985 aaKnown RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 JAMLQ86YT9 394 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 DDIASQ8IXT1 998 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 GSPT2Q8IYD1 628 aaKnown RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 IL31RAQ8NI17 732 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 KLHL29Q96CT2 875 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 TRIM51Q9BSJ1 452 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 DCLK3Q9C098 648 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 KDM4CQ9H3R0 1056 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CLCA2Q9UQC9 943 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 NFKBIEO00221 500 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 ZNF200P98182 395 aaPredicted RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 NAA25Q14CX7 972 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 E4F1Q66K89 784 aaPredicted RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 NCLNQ969V3 563 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 LRRC1Q9BTT6 524 aa10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 CPSF2Q9P2I0 782 aaKnown RBP10.76□□□□□ -0.69
NIPAL3-201ENST00000003912 USP18Q9UMW8 372 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms