RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TSEN2Q8NCE0 465 aaKnown RBP4.43□□□□□ -1.7
CFTR-201ENST00000003084 UBA3Q8TBC4 463 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 ZNF507Q8TCN5 953 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 DNAJB3Q8WWF6 145 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 APBB2Q92870 758 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 FOXJ1Q92949 421 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 EXT2Q93063 718 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 CCDC124Q96CT7 223 aaKnown RBP4.43□□□□□ -1.7
CFTR-201ENST00000003084 TMEM176AQ96HP8 235 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 RNPC3Q96LT9 517 aaKnown RBP4.43□□□□□ -1.7
CFTR-201ENST00000003084 LRRC37BQ96QE4 947 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 FDXACB1Q9BRP7 624 aaPredicted RBP4.43□□□□□ -1.7
CFTR-201ENST00000003084 WDCPQ9H6R7 721 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 FAM49BQ9NUQ9 324 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 MRGBPQ9NV56 204 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 KBTBD4Q9NVX7 518 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 KLK14Q9P0G3 267 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 LIMD1Q9UGP4 676 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 PRG3Q9Y2Y8 225 aaPredicted RBP4.43□□□□□ -1.7
CFTR-201ENST00000003084 DNMT3AQ9Y6K1 912 aaPredicted RBP4.43□□□□□ -1.7
CFTR-201ENST00000003084 SLC30A1Q9Y6M5 507 aa4.43□□□□□ -1.7
CFTR-201ENST00000003084 FRMPD4Q14CM0 1322 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 A0A1B0GUA9 196 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 ZW10O43264 779 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PYGLP06737 847 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 WEE2P0C1S8 567 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 GDF10P55107 478 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CDR2Q01850 454 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 EIF2B5Q13144 721 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 CBLBQ13191 982 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PCSK7Q16549 785 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 DCAF6Q58WW2 860 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 AARS2Q5JTZ9 985 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 ARMC6Q6NXE6 501 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 LRIG3Q6UXM1 1119 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CCDC149Q6ZUS6 474 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 OTOP1Q7RTM1 612 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 TFB1MQ8WVM0 346 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 ZNF516Q92618 1163 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CAMKK2Q96RR4 588 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 OXCT2Q9BYC2 517 aaPredicted RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 DCLK3Q9C098 648 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CRISPLD2Q9H0B8 497 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 BRD8Q9H0E9 1235 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 VPS11Q9H270 941 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 RASSF4Q9H2L5 321 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 RRAGDQ9NQL2 400 aaPredicted RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 CHST12Q9NRB3 414 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 TMPRSS4Q9NRS4 437 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 ABCF3Q9NUQ8 709 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PQBP1O60828 265 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 ACSL3O95573 720 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 NAT2P11245 290 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 VCLP18206 1134 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 IFNAR2P48551 515 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PSMA6P60900 246 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 TEDDM1Q5T9Z0 273 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 TATDN1Q6P1N9 297 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 EFL1Q7Z2Z2 1120 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 ZBED8Q8IZ13 594 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 VWA5B2Q8N398 1253 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CFAP61Q8NHU2 1237 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 HPS3Q969F9 1004 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 MTBPQ96DY7 904 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 KRT82Q9NSB4 513 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 APOBEC2Q9Y235 224 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 AAR2Q9Y312 384 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 PKP3Q9Y446 797 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 UBIAD1Q9Y5Z9 338 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 UBA6A0AVT1 1052 aaPredicted RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 NDUFS3O75489 264 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 LUC7L3O95232 432 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 HMGCRP04035 888 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PAEPP09466 180 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 NR1D1P20393 614 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 HADHAP40939 763 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 TUFMP49411 452 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 RGS4P49798 205 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 LAPTM5Q13571 262 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 SLC12A1Q13621 1099 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 BTG3Q14201 252 aaPredicted RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 NTRK3Q16288 839 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CCDC38Q502W7 563 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PAN2Q504Q3 1202 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 FASTKD1Q53R41 847 aaKnown RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 FBXO47Q5MNV8 452 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CCNJLQ8IV13 435 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 DCLK2Q8N568 766 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 SMARCD1Q96GM5 515 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 UBXN6Q9BZV1 441 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 TMEM117Q9H0C3 514 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 RNF208Q9H0X6 261 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 PRDM9Q9NQV7 894 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 ARHGEF38Q9NXL2 777 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 CYP39A1Q9NYL5 469 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 TBK1Q9UHD2 729 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 GTF3C4Q9UKN8 822 aa4.42□□□□□ -1.7
CFTR-201ENST00000003084 BARX2Q9UMQ3 279 aaPredicted RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 PACSIN2Q9UNF0 486 aaPredicted RBP4.42□□□□□ -1.7
CFTR-201ENST00000003084 NALCNQ8IZF0 1738 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms