RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ssu72Q9CY97 194 aaKnown RBP19.15■□□□□ 0.66
Trim47-202ENSMUST00000106441 Cyp2s1Q9DBX6 501 aa19.15■□□□□ 0.66
Trim47-202ENSMUST00000106441 Clec4aQ9QZ15 238 aa19.15■□□□□ 0.66
Trim47-202ENSMUST00000106441 Anapc7Q9WVM3 565 aa19.15■□□□□ 0.66
Trim47-202ENSMUST00000106441 Wdr81Q5ND34 1934 aa19.15■□□□□ 0.66
Trim47-202ENSMUST00000106441 Gm4841E9QAA8 417 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Rab20P35295 233 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 VcpQ01853 806 aaKnown RBP19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Calb2Q08331 271 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ppp1r12cQ3UMT1 782 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Fam8a1Q3URQ4 399 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Gm13103Q4VAD2 491 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Eif4bQ8BGD9 611 aaKnown RBP19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Leg1Q8C6C9 337 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Lonp1Q8CGK3 949 aaKnown RBP19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Sugp1Q8CH02 643 aaKnown RBP19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tspan8Q8R3G9 235 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Usp11Q99K46 921 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Pold3Q9EQ28 462 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Rsc1a1Q9ER99 582 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ddx24Q9ESV0 857 aaKnown RBP19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tnfsf13bQ9WU72 309 aa19.14■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ppp1r36D3Z0R2 411 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Pcdh9F8VPK8 1237 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Slc6a20bO88575 635 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Syce2Q505B8 171 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Orc2Q60862 576 aaKnown RBP19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Camta2Q80Y50 1208 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Uba6Q8C7R4 1053 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Dnajc9Q91WN1 259 aaKnown RBP19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 1700016D06RikQ9DAA5 166 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Cables1Q9ESJ1 568 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 LctF8VPT3 1931 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Cyp27b1O35084 507 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Clcn3P51791 818 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ugt1a2P70691 533 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Pde1bQ01065 535 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Garnl3Q3V0G7 1038 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Psd2Q6P1I6 770 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Gemin4Q6P6L6 1058 aaKnown RBP19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Acot5Q6Q2Z6 421 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Lsm8Q6ZWM4 96 aaKnown RBP19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Fbxl13Q8CDU4 790 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Uroc1Q8VC12 676 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Olfr1499Q8VG65 314 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Dnajc3Q91YW3 504 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tk2Q9R088 270 aa19.13■□□□□ 0.65
Trim47-202ENSMUST00000106441 Clca3bE9PUL3 1044 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 GclmO09172 274 aaKnown RBP19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Anxa8O35640 327 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ets2P15037 468 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tnni3P48787 211 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 PctpP53808 214 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 RilpQ5ND29 369 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Syn2Q64332 586 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Gja6Q6S5G4 283 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ca9Q8VHB5 437 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Nek8Q91ZR4 698 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tmod3Q9JHJ0 352 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 PorcnQ9JJJ7 461 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Cib2Q9Z309 187 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Gm43951A0A0N4SUT6 962 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 EpoP07321 192 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Hcls1P49710 486 aaKnown RBP19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Nub1P54729 614 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Srebf2Q3U1N2 1130 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ahcyl1Q80SW1 530 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Q80ZQ3 298 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Wrap53Q8VC51 532 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Rtfdc1Q99K95 307 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Pbx4Q99NE9 378 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Zfp623Q9CY99 499 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 GraspQ9JJA9 392 aa19.12■□□□□ 0.65
Trim47-202ENSMUST00000106441 Svs3aF2Z472 265 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Vti1aO89116 217 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Rpl7aP12970 266 aaKnown RBP19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ptk2P34152 1090 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Ly6dP35459 127 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 PhbP67778 272 aaKnown RBP19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 HmgcrQ01237 887 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Pou6f1Q07916 301 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Dzip1lQ499E4 774 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tcaf1Q8BNE1 924 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Daam1Q8BPM0 1077 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 CenpuQ8C4M7 410 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Arhgap18Q8K0Q5 663 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Olfr395Q8VGR3 312 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Sec63Q8VHE0 760 aaKnown RBP19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Pcdha9Q91Y11 979 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 DcpsQ9DAR7 338 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Tsc1Q9EP53 1161 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Fbxo16Q9QZM9 334 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Diaph3Q9Z207 1171 aa19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Lama2Q60675 3118 aaKnown RBP19.11■□□□□ 0.65
Trim47-202ENSMUST00000106441 Serpinb3aG3X9V8 387 aa19.1■□□□□ 0.65
Trim47-202ENSMUST00000106441 Rpl21O09167 160 aaKnown RBP19.1■□□□□ 0.65
Trim47-202ENSMUST00000106441 VegfaQ00731 214 aa19.1■□□□□ 0.65
Trim47-202ENSMUST00000106441 Rcsd1Q3UZA1 412 aa19.1■□□□□ 0.65
Trim47-202ENSMUST00000106441 Spag6Q3V0U9 509 aa19.1■□□□□ 0.65
Trim47-202ENSMUST00000106441 DeptorQ570Y9 409 aa19.1■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms