RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 VegfaQ00731 214 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Gdf9Q07105 441 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Ifit1Q64282 463 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Naa35Q6PHQ8 725 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Lrrd1Q8C0R9 853 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Cwf19l1Q8CI33 537 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Iqca1Q9CUL5 857 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Cyc1Q9D0M3 325 aaKnown RBP11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Sec13Q9D1M0 322 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Timp4Q9JHB3 224 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Prpf40aQ9R1C7 953 aaKnown RBP11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Stau1Q9Z108 487 aaKnown RBP11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 VcanQ62059 3357 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Tmem245B1AZA5 876 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Gm5160F8VPN3 147 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Vmn2r71L7N2D8 855 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Irf8P23611 424 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Polr3bP59470 1133 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Sim1Q61045 765 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Ggnbp1Q6K1E7 370 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Spata20Q80YT5 790 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Wipf1Q8K1I7 493 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Adgrf1Q8VEC3 908 aa11.58□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Dopey2Q3UHQ6 2295 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Auts2A0A087WPF7 1261 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Elmsan1E9Q2I4 1089 aaKnown RBP11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Olfr1354E9Q5G9 310 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Rc3h2P0C090 1187 aaKnown RBP11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Msh3P13705 1091 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 SnrpfP62307 86 aaKnown RBP11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Zbtb48Q1H9T6 681 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Nell1Q2VWQ2 810 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Q3UZV7 1028 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Bbof1Q3V079 533 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 TbataQ7TSD4 393 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Zdhhc19Q810M5 347 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Taf15Q8BQ46 557 aaKnown RBP11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Afap1l1Q8BZI0 768 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Csgalnact2Q8C1F4 542 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Pcdhb2Q91Y00 799 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 PirQ9D711 290 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Tbx18Q9EPZ6 613 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Mtm1Q9Z2C5 603 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Arhgef10Q8C033 1345 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 BC034090A0A087WP46 1202 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Prdm15E9Q8T2 1174 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Becn1O88597 448 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Timp1P12032 205 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 RdxP26043 583 aaKnown RBP11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Lefty2P57785 368 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Arnt2Q61324 712 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Snx19Q6P4T1 997 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Rps6ka5Q8C050 863 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Parp9Q8CAS9 866 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Tp53inp2Q8CFU8 221 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Znf426Q8R1D1 550 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Arhgef3Q91X46 524 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Tom1l1Q923U0 474 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Mrps2Q924T2 291 aaKnown RBP11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Tnni1Q9WUZ5 187 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Mettl1Q9Z120 268 aa11.57□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Jmjd1cQ69ZK6 2350 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 A0A1L1STL9 112 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Klhdc7aA2APT9 773 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Vmn2r72D3Z4N8 856 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 P01652 108 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Anxa5P48036 319 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 IduaP48441 634 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 AY761185Q5ERI8 94 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 IbspQ61711 324 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Rtl3Q6P1Y1 553 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Tmeff1Q6PFE7 372 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Fbxo38Q8BMI0 1194 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Zdhhc14Q8BQQ1 489 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Q8CDN1 933 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Olfr97Q8VFE1 310 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Afg3l1Q920A7 789 aaKnown RBP11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Q922M7 232 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Trim11Q99PQ2 467 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Krt23Q99PS0 422 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Wdr45bQ9CR39 344 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Ddah1Q9CWS0 285 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Prl2b1Q9DAZ2 228 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Sphk2Q9JIA7 617 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Numa1E9Q7G0 2094 aaKnown RBP11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 KalrnA2CG49 2964 aa11.56□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Cacna1eQ61290 2272 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Ptpn3A2ALK8 913 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 NuggcD3YWJ0 796 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Fbrsl1E9Q9T0 1031 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Nfkb1P25799 971 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Cnr2P47936 347 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Pi4k2aQ2TBE6 479 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Gucy2gQ6TL19 1100 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Zfp317Q8C0Q5 607 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Fbxo48Q8CAT8 161 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Cog3Q8CI04 820 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Dusp15Q8R4V2 235 aa11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 RnmtQ9D0L8 465 aaKnown RBP11.55□□□□□ -0.56
Ccdc60-202ENSMUST00000086483 Rrp8Q9DB85 457 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms