RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Itih1Q61702 907 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Fam167aQ6P1G6 215 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lrrc15Q80X72 579 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc15a5Q8CBB2 566 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Kat5Q8CHK4 513 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Glis1Q8K1M4 789 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Zmynd10Q99ML0 440 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Zbed3Q9D0L1 228 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gtf3c6Q9D8P7 227 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cnga3Q9JJZ8 631 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rfwd2Q9R1A8 733 aaKnown RBP12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Hes2O54792 157 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Scp2P32020 547 aaKnown RBP12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lrch1P62046 709 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Arhgap17Q3UIA2 846 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Psg29Q3URN6 468 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Sdf4Q61112 361 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Bag5Q8CI32 447 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 MrgbpQ9DAT2 204 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Aff4Q9ESC8 1160 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 GraspQ9JJA9 392 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ap1g2O88512 791 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 ZfaP23607 742 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Hsd17b4P51660 735 aaKnown RBP12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ndst1Q3UHN9 882 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Elmo2Q8BHL5 732 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gtse1Q8R080 741 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc30a5Q8R4H9 761 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 RnpepQ8VCT3 650 aaKnown RBP12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ndufa10Q99LC3 355 aaKnown RBP12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cul2Q9D4H8 745 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 B4galt5Q9JMK0 388 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ms4a14A0A087WSD2 1232 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gm6588E9Q3K0 461 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Kifc3O35231 824 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cd19P25918 547 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rpl10aP53026 217 aaKnown RBP12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 PrlrQ08501 608 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pfdn4Q3UWL8 134 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pcdhb7Q8CDY9 829 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Zdhhc3Q8R173 299 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pde2aQ922S4 916 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Pard6bQ9JK83 371 aa12.36□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cyp4f17G3UW78 524 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 GsapQ3TCV3 858 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Spryd7Q3TFQ1 196 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rbbp7Q60973 425 aaKnown RBP12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Kcnt1Q6ZPR4 1224 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 PdgfcQ8CI19 345 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Acad9Q8JZN5 625 aaKnown RBP12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rprd1aQ8VDS4 312 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cyp4f16Q99N17 524 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lrrc71Q9D3W5 558 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gm21973F6WEZ7 68 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Fgfr1P16092 822 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gucy2fQ5SDA5 1108 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ints6lQ8BND4 861 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Q8BWG4 1187 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 GldcQ91W43 1025 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mccc1Q99MR8 717 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Psmd9Q9CR00 222 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Erap1Q9EQH2 930 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Usp35M0QWN7 1009 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 PtpreP49446 699 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Sox8Q04886 464 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tekt4Q149S1 447 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Bfsp2Q6NVD9 416 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Abhd8Q8R0P8 439 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rgs10Q9CQE5 181 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Eif2ak3Q9Z2B5 1114 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Vmn2r100E9QAZ9 850 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ess2O70279 479 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Khdrbs1Q60749 443 aaKnown RBP12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Txndc8Q69AB2 127 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Styk1Q6J9G1 429 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mettl25Q6NXH8 597 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 CtifQ6PEE2 600 aaKnown RBP12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gpr151Q7TSN6 422 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nipal1Q8BMW7 416 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rnf31Q924T7 1066 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cdc42ep5Q9Z0X0 150 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Scg3P47867 471 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Parp3Q3ULW8 533 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Smarcd1Q61466 515 aaKnown RBP12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gcfc2Q8BKT3 769 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Colgalt1Q8K297 617 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mrpl47Q8K2Y7 252 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 CarfQ8VHI4 689 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Yaf2Q99LW6 179 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lpin2Q99PI5 893 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Igdcc4Q9EQS9 1252 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Nfu1Q9QZ23 255 aa12.35□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tcp10cE9Q046 482 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 AlpiF8VPQ6 554 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cd70O55237 195 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rnf19aP50636 840 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Slc38a5Q3U1J0 479 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Scube3Q66PY1 993 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Fam107aQ78TU8 144 aa12.34□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Wnk4Q80UE6 1222 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms